JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wcwa_.name2015-04-17 18:00 0 Job name flag file
[ ]jp_I6zWGL4.align2015-04-17 19:41 268KPSIBLAST alignment in FASTA format
[TXT]jp_I6zWGL4.als2015-04-17 19:42 4.9KAlscript command file for PS/PDF output
[ ]jp_I6zWGL4.blast.gz2015-04-17 19:40 4.4MCompressed PSIBLAST output file
[TXT]jp_I6zWGL4.coils.csv2015-04-17 19:42 1.5KCOILS output in CSV format
[ ]jp_I6zWGL4.coilseq.lupas_142015-04-17 19:42 11KCOILS output, window length 14
[ ]jp_I6zWGL4.coilseq.lupas_212015-04-17 19:42 11KCOILS output, window length 21
[ ]jp_I6zWGL4.coilseq.lupas_282015-04-17 19:42 11KCOILS output, window length 28
[ ]jp_I6zWGL4.concise2015-04-17 19:42 530KPrediction: coiled-coil, solvent, alignment
[ ]jp_I6zWGL4.concise.blc2015-04-17 19:42 268KBLC format prediction and alignment data
[ ]jp_I6zWGL4.concise.fasta2015-04-17 19:42 271KPrediction: coiled-coil, solvent, alignment
[ ]jp_I6zWGL4.concise.pdf2015-04-17 19:42 1.9MPDF prediction and alignment data
[ ]jp_I6zWGL4.concise.ps2015-04-17 19:42 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_I6zWGL4.fasta2015-04-17 19:35 270 Input query sequence in FASTA format
[ ]jp_I6zWGL4.full_MSA.fasta2015-04-17 19:41 15MFull MSA before JPred filters in FASTA
[TXT]jp_I6zWGL4.full_MSA.fasta.noGaps.html2015-04-17 19:42 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_I6zWGL4.full_MSA.fasta.withGaps.html2015-04-17 19:42 44MFull MSA before JPred filters in FASTA
[ ]jp_I6zWGL4.hmm2015-04-17 19:42 48KHHMer2 profile of the alignment
[TXT]jp_I6zWGL4.html2015-04-17 19:42 484KHTML prediction and alignment data
[ ]jp_I6zWGL4.input2015-04-17 18:00 261 Raw input data for analysis
[ ]jp_I6zWGL4.jalview2015-04-17 19:42 6.0KJalview annotation file for alignment
[ ]jp_I6zWGL4.jnet2015-04-17 19:42 9.3KJnet secondary structure output
[TXT]jp_I6zWGL4.profile2015-04-17 19:38 41KPSIBLAST profile from alignment
[ ]jp_I6zWGL4.pssm2015-04-17 19:41 55KPSIBLAST PSSM for Jnet
[TXT]jp_I6zWGL4.results.html2016-02-15 12:19 115KJPred results page
[TXT]jp_I6zWGL4.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_I6zWGL4.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_I6zWGL4.seq2015-04-17 18:00 270 Sequence data file
[TXT]jp_I6zWGL4.simple.html2015-04-17 19:42 2.0KBrief HTML: sequence and prediction only
[TXT]jp_I6zWGL4.svg.html2015-04-17 19:42 107KJalview SVG summary of results
[ ]jp_I6zWGL4.tar.gz2015-04-17 19:43 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.