JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wdda1.name2015-04-17 18:36 0 Job name flag file
[ ]jp_kkQiwTA.align2015-04-17 20:42 159KPSIBLAST alignment in FASTA format
[TXT]jp_kkQiwTA.als2015-04-17 20:42 4.3KAlscript command file for PS/PDF output
[ ]jp_kkQiwTA.blast.gz2015-04-17 20:41 1.6MCompressed PSIBLAST output file
[TXT]jp_kkQiwTA.coils.csv2015-04-17 20:42 1.9KCOILS output in CSV format
[ ]jp_kkQiwTA.coilseq.lupas_142015-04-17 20:42 14KCOILS output, window length 14
[ ]jp_kkQiwTA.coilseq.lupas_212015-04-17 20:42 14KCOILS output, window length 21
[ ]jp_kkQiwTA.coilseq.lupas_282015-04-17 20:42 14KCOILS output, window length 28
[ ]jp_kkQiwTA.concise2015-04-17 20:42 322KPrediction: coiled-coil, solvent, alignment
[ ]jp_kkQiwTA.concise.blc2015-04-17 20:42 161KBLC format prediction and alignment data
[ ]jp_kkQiwTA.concise.fasta2015-04-17 20:42 162KPrediction: coiled-coil, solvent, alignment
[ ]jp_kkQiwTA.concise.pdf2015-04-17 20:43 1.0MPDF prediction and alignment data
[ ]jp_kkQiwTA.concise.ps2015-04-17 20:42 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_kkQiwTA.fasta2015-04-17 20:35 342 Input query sequence in FASTA format
[ ]jp_kkQiwTA.full_MSA.fasta2015-04-17 20:42 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_kkQiwTA.full_MSA.fasta.noGaps.html2015-04-17 20:43 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_kkQiwTA.full_MSA.fasta.withGaps.html2015-04-17 20:43 10MFull MSA before JPred filters in FASTA
[ ]jp_kkQiwTA.hmm2015-04-17 20:42 61KHHMer2 profile of the alignment
[TXT]jp_kkQiwTA.html2015-04-17 20:42 278KHTML prediction and alignment data
[ ]jp_kkQiwTA.input2015-04-17 18:36 332 Raw input data for analysis
[ ]jp_kkQiwTA.jalview2015-04-17 20:42 7.3KJalview annotation file for alignment
[ ]jp_kkQiwTA.jnet2015-04-17 20:42 12KJnet secondary structure output
[TXT]jp_kkQiwTA.profile2015-04-17 20:39 52KPSIBLAST profile from alignment
[ ]jp_kkQiwTA.pssm2015-04-17 20:42 70KPSIBLAST PSSM for Jnet
[TXT]jp_kkQiwTA.results.html2016-02-15 12:19 139KJPred results page
[TXT]jp_kkQiwTA.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_kkQiwTA.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_kkQiwTA.seq2015-04-17 18:36 342 Sequence data file
[TXT]jp_kkQiwTA.simple.html2015-04-17 20:42 2.0KBrief HTML: sequence and prediction only
[TXT]jp_kkQiwTA.svg.html2015-04-17 20:43 131KJalview SVG summary of results
[ ]jp_kkQiwTA.tar.gz2015-04-17 20:43 3.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.