JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wlga_.name2015-04-17 16:11 0 Job name flag file
[ ]jp_7qpmGlK.align2015-04-17 16:42 80KPSIBLAST alignment in FASTA format
[TXT]jp_7qpmGlK.als2015-04-17 16:42 3.4KAlscript command file for PS/PDF output
[ ]jp_7qpmGlK.blast.gz2015-04-17 16:40 13MCompressed PSIBLAST output file
[TXT]jp_7qpmGlK.coils.csv2015-04-17 16:42 1.7KCOILS output in CSV format
[ ]jp_7qpmGlK.coilseq.lupas_142015-04-17 16:42 12KCOILS output, window length 14
[ ]jp_7qpmGlK.coilseq.lupas_212015-04-17 16:42 12KCOILS output, window length 21
[ ]jp_7qpmGlK.coilseq.lupas_282015-04-17 16:42 12KCOILS output, window length 28
[ ]jp_7qpmGlK.concise2015-04-17 16:42 168KPrediction: coiled-coil, solvent, alignment
[ ]jp_7qpmGlK.concise.blc2015-04-17 16:42 83KBLC format prediction and alignment data
[ ]jp_7qpmGlK.concise.fasta2015-04-17 16:42 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_7qpmGlK.concise.pdf2015-04-17 16:42 566KPDF prediction and alignment data
[ ]jp_7qpmGlK.concise.ps2015-04-17 16:42 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_7qpmGlK.fasta2015-04-17 16:36 310 Input query sequence in FASTA format
[ ]jp_7qpmGlK.full_MSA.fasta2015-04-17 16:41 42MFull MSA before JPred filters in FASTA
[TXT]jp_7qpmGlK.full_MSA.fasta.noGaps.html2015-04-17 16:43 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_7qpmGlK.full_MSA.fasta.withGaps.html2015-04-17 16:43 87MFull MSA before JPred filters in FASTA
[ ]jp_7qpmGlK.hmm2015-04-17 16:42 55KHHMer2 profile of the alignment
[TXT]jp_7qpmGlK.html2015-04-17 16:42 148KHTML prediction and alignment data
[ ]jp_7qpmGlK.input2015-04-17 16:11 300 Raw input data for analysis
[ ]jp_7qpmGlK.jalview2015-04-17 16:42 6.4KJalview annotation file for alignment
[ ]jp_7qpmGlK.jnet2015-04-17 16:42 11KJnet secondary structure output
[TXT]jp_7qpmGlK.profile2015-04-17 16:39 47KPSIBLAST profile from alignment
[ ]jp_7qpmGlK.pssm2015-04-17 16:42 63KPSIBLAST PSSM for Jnet
[TXT]jp_7qpmGlK.results.html2016-02-15 12:19 120KJPred results page
[TXT]jp_7qpmGlK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7qpmGlK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7qpmGlK.seq2015-04-17 16:11 310 Sequence data file
[TXT]jp_7qpmGlK.simple.html2015-04-17 16:42 1.8KBrief HTML: sequence and prediction only
[TXT]jp_7qpmGlK.svg.html2015-04-17 16:43 112KJalview SVG summary of results
[ ]jp_7qpmGlK.tar.gz2015-04-17 16:43 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.