JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:39 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x91a_.name2015-04-17 17:23 0 Job name flag file
[ ]jp_zf4tw4L.align2015-04-17 18:38 183KPSIBLAST alignment in FASTA format
[TXT]jp_zf4tw4L.als2015-04-17 18:38 2.2KAlscript command file for PS/PDF output
[ ]jp_zf4tw4L.blast.gz2015-04-17 18:36 1.5MCompressed PSIBLAST output file
[TXT]jp_zf4tw4L.coils.csv2015-04-17 18:38 924 COILS output in CSV format
[ ]jp_zf4tw4L.coilseq.lupas_142015-04-17 18:38 6.3KCOILS output, window length 14
[ ]jp_zf4tw4L.coilseq.lupas_212015-04-17 18:38 6.3KCOILS output, window length 21
[ ]jp_zf4tw4L.coilseq.lupas_282015-04-17 18:38 6.3KCOILS output, window length 28
[ ]jp_zf4tw4L.concise2015-04-17 18:38 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_zf4tw4L.concise.blc2015-04-17 18:38 182KBLC format prediction and alignment data
[ ]jp_zf4tw4L.concise.fasta2015-04-17 18:38 184KPrediction: coiled-coil, solvent, alignment
[ ]jp_zf4tw4L.concise.pdf2015-04-17 18:38 1.2MPDF prediction and alignment data
[ ]jp_zf4tw4L.concise.ps2015-04-17 18:38 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_zf4tw4L.fasta2015-04-17 18:31 164 Input query sequence in FASTA format
[ ]jp_zf4tw4L.full_MSA.fasta2015-04-17 18:36 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_zf4tw4L.full_MSA.fasta.noGaps.html2015-04-17 18:38 715KFull MSA before JPred filters in FASTA
[TXT]jp_zf4tw4L.full_MSA.fasta.withGaps.html2015-04-17 18:38 12MFull MSA before JPred filters in FASTA
[ ]jp_zf4tw4L.hmm2015-04-17 18:38 28KHHMer2 profile of the alignment
[TXT]jp_zf4tw4L.html2015-04-17 18:38 411KHTML prediction and alignment data
[ ]jp_zf4tw4L.input2015-04-17 17:23 156 Raw input data for analysis
[ ]jp_zf4tw4L.jalview2015-04-17 18:38 3.9KJalview annotation file for alignment
[ ]jp_zf4tw4L.jnet2015-04-17 18:38 5.5KJnet secondary structure output
[TXT]jp_zf4tw4L.profile2015-04-17 18:34 24KPSIBLAST profile from alignment
[ ]jp_zf4tw4L.pssm2015-04-17 18:38 32KPSIBLAST PSSM for Jnet
[TXT]jp_zf4tw4L.results.html2016-02-15 12:19 68KJPred results page
[TXT]jp_zf4tw4L.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zf4tw4L.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zf4tw4L.seq2015-04-17 17:23 164 Sequence data file
[TXT]jp_zf4tw4L.simple.html2015-04-17 18:38 1.3KBrief HTML: sequence and prediction only
[TXT]jp_zf4tw4L.svg.html2015-04-17 18:39 60KJalview SVG summary of results
[ ]jp_zf4tw4L.tar.gz2015-04-17 18:39 4.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.