JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:34 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1xdna_.name2015-04-17 17:24 0 Job name flag file
[ ]jp_77B53GZ.align2015-04-17 18:34 41KPSIBLAST alignment in FASTA format
[TXT]jp_77B53GZ.als2015-04-17 18:34 3.4KAlscript command file for PS/PDF output
[ ]jp_77B53GZ.blast.gz2015-04-17 18:34 105KCompressed PSIBLAST output file
[TXT]jp_77B53GZ.coils.csv2015-04-17 18:34 1.6KCOILS output in CSV format
[ ]jp_77B53GZ.coilseq.lupas_142015-04-17 18:34 11KCOILS output, window length 14
[ ]jp_77B53GZ.coilseq.lupas_212015-04-17 18:34 11KCOILS output, window length 21
[ ]jp_77B53GZ.coilseq.lupas_282015-04-17 18:34 11KCOILS output, window length 28
[ ]jp_77B53GZ.concise2015-04-17 18:34 90KPrediction: coiled-coil, solvent, alignment
[ ]jp_77B53GZ.concise.blc2015-04-17 18:34 44KBLC format prediction and alignment data
[ ]jp_77B53GZ.concise.fasta2015-04-17 18:34 43KPrediction: coiled-coil, solvent, alignment
[ ]jp_77B53GZ.concise.pdf2015-04-17 18:34 294KPDF prediction and alignment data
[ ]jp_77B53GZ.concise.ps2015-04-17 18:34 5.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_77B53GZ.fasta2015-04-17 18:31 281 Input query sequence in FASTA format
[ ]jp_77B53GZ.full_MSA.fasta2015-04-17 18:34 204KFull MSA before JPred filters in FASTA
[TXT]jp_77B53GZ.full_MSA.fasta.noGaps.html2015-04-17 18:34 79KFull MSA before JPred filters in FASTA
[TXT]jp_77B53GZ.full_MSA.fasta.withGaps.html2015-04-17 18:34 869KFull MSA before JPred filters in FASTA
[ ]jp_77B53GZ.hmm2015-04-17 18:34 50KHHMer2 profile of the alignment
[TXT]jp_77B53GZ.html2015-04-17 18:34 91KHTML prediction and alignment data
[ ]jp_77B53GZ.input2015-04-17 17:24 272 Raw input data for analysis
[ ]jp_77B53GZ.jalview2015-04-17 18:34 6.0KJalview annotation file for alignment
[ ]jp_77B53GZ.jnet2015-04-17 18:34 9.7KJnet secondary structure output
[TXT]jp_77B53GZ.profile2015-04-17 18:33 42KPSIBLAST profile from alignment
[ ]jp_77B53GZ.pssm2015-04-17 18:34 57KPSIBLAST PSSM for Jnet
[TXT]jp_77B53GZ.results.html2016-02-15 12:19 111KJPred results page
[TXT]jp_77B53GZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_77B53GZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_77B53GZ.seq2015-04-17 17:24 281 Sequence data file
[TXT]jp_77B53GZ.simple.html2015-04-17 18:34 1.7KBrief HTML: sequence and prediction only
[TXT]jp_77B53GZ.svg.html2015-04-17 18:34 103KJalview SVG summary of results
[ ]jp_77B53GZ.tar.gz2015-04-17 18:34 618KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.