JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:42 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1xm3a_.name2015-04-17 16:12 0 Job name flag file
[ ]jp_7NFpFIt.align2015-04-17 16:42 119KPSIBLAST alignment in FASTA format
[TXT]jp_7NFpFIt.als2015-04-17 16:42 3.7KAlscript command file for PS/PDF output
[ ]jp_7NFpFIt.blast.gz2015-04-17 16:41 2.3MCompressed PSIBLAST output file
[TXT]jp_7NFpFIt.coils.csv2015-04-17 16:42 1.5KCOILS output in CSV format
[ ]jp_7NFpFIt.coilseq.lupas_142015-04-17 16:42 10KCOILS output, window length 14
[ ]jp_7NFpFIt.coilseq.lupas_212015-04-17 16:42 10KCOILS output, window length 21
[ ]jp_7NFpFIt.coilseq.lupas_282015-04-17 16:42 10KCOILS output, window length 28
[ ]jp_7NFpFIt.concise2015-04-17 16:42 240KPrediction: coiled-coil, solvent, alignment
[ ]jp_7NFpFIt.concise.blc2015-04-17 16:42 121KBLC format prediction and alignment data
[ ]jp_7NFpFIt.concise.fasta2015-04-17 16:42 121KPrediction: coiled-coil, solvent, alignment
[ ]jp_7NFpFIt.concise.pdf2015-04-17 16:42 775KPDF prediction and alignment data
[ ]jp_7NFpFIt.concise.ps2015-04-17 16:42 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_7NFpFIt.fasta2015-04-17 16:37 260 Input query sequence in FASTA format
[ ]jp_7NFpFIt.full_MSA.fasta2015-04-17 16:41 5.8MFull MSA before JPred filters in FASTA
[TXT]jp_7NFpFIt.full_MSA.fasta.noGaps.html2015-04-17 16:42 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_7NFpFIt.full_MSA.fasta.withGaps.html2015-04-17 16:42 24MFull MSA before JPred filters in FASTA
[ ]jp_7NFpFIt.hmm2015-04-17 16:42 46KHHMer2 profile of the alignment
[TXT]jp_7NFpFIt.html2015-04-17 16:42 231KHTML prediction and alignment data
[ ]jp_7NFpFIt.input2015-04-17 16:12 251 Raw input data for analysis
[ ]jp_7NFpFIt.jalview2015-04-17 16:42 5.8KJalview annotation file for alignment
[ ]jp_7NFpFIt.jnet2015-04-17 16:42 8.9KJnet secondary structure output
[TXT]jp_7NFpFIt.profile2015-04-17 16:40 39KPSIBLAST profile from alignment
[ ]jp_7NFpFIt.pssm2015-04-17 16:42 52KPSIBLAST PSSM for Jnet
[TXT]jp_7NFpFIt.results.html2016-02-15 12:19 108KJPred results page
[TXT]jp_7NFpFIt.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7NFpFIt.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7NFpFIt.seq2015-04-17 16:12 260 Sequence data file
[TXT]jp_7NFpFIt.simple.html2015-04-17 16:42 1.8KBrief HTML: sequence and prediction only
[TXT]jp_7NFpFIt.svg.html2015-04-17 16:42 100KJalview SVG summary of results
[ ]jp_7NFpFIt.tar.gz2015-04-17 16:42 5.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.