JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:52 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1yfqa_.name2015-04-17 16:13 0 Job name flag file
[ ]jp_CQkxNX8.align2015-04-17 17:41 272KPSIBLAST alignment in FASTA format
[TXT]jp_CQkxNX8.als2015-04-17 17:41 6.0KAlscript command file for PS/PDF output
[ ]jp_CQkxNX8.blast.gz2015-04-17 17:12 116MCompressed PSIBLAST output file
[TXT]jp_CQkxNX8.coils.csv2015-04-17 17:41 2.0KCOILS output in CSV format
[ ]jp_CQkxNX8.coilseq.lupas_142015-04-17 17:41 14KCOILS output, window length 14
[ ]jp_CQkxNX8.coilseq.lupas_212015-04-17 17:41 14KCOILS output, window length 21
[ ]jp_CQkxNX8.coilseq.lupas_282015-04-17 17:41 14KCOILS output, window length 28
[ ]jp_CQkxNX8.concise2015-04-17 17:41 544KPrediction: coiled-coil, solvent, alignment
[ ]jp_CQkxNX8.concise.blc2015-04-17 17:41 273KBLC format prediction and alignment data
[ ]jp_CQkxNX8.concise.fasta2015-04-17 17:41 275KPrediction: coiled-coil, solvent, alignment
[ ]jp_CQkxNX8.concise.pdf2015-04-17 17:42 1.8MPDF prediction and alignment data
[ ]jp_CQkxNX8.concise.ps2015-04-17 17:41 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_CQkxNX8.fasta2015-04-17 16:38 359 Input query sequence in FASTA format
[ ]jp_CQkxNX8.full_MSA.fasta2015-04-17 17:32 475MFull MSA before JPred filters in FASTA
[TXT]jp_CQkxNX8.full_MSA.fasta.noGaps.html2015-04-17 17:52 19MFull MSA before JPred filters in FASTA
[TXT]jp_CQkxNX8.full_MSA.fasta.withGaps.html2015-04-17 17:52 813MFull MSA before JPred filters in FASTA
[ ]jp_CQkxNX8.hmm2015-04-17 17:41 64KHHMer2 profile of the alignment
[TXT]jp_CQkxNX8.html2015-04-17 17:41 448KHTML prediction and alignment data
[ ]jp_CQkxNX8.input2015-04-17 16:13 349 Raw input data for analysis
[ ]jp_CQkxNX8.jalview2015-04-17 17:41 7.6KJalview annotation file for alignment
[ ]jp_CQkxNX8.jnet2015-04-17 17:41 12KJnet secondary structure output
[TXT]jp_CQkxNX8.profile2015-04-17 17:05 55KPSIBLAST profile from alignment
[ ]jp_CQkxNX8.pssm2015-04-17 17:41 73KPSIBLAST PSSM for Jnet
[TXT]jp_CQkxNX8.results.html2016-02-15 12:19 145KJPred results page
[TXT]jp_CQkxNX8.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_CQkxNX8.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_CQkxNX8.seq2015-04-17 16:13 359 Sequence data file
[TXT]jp_CQkxNX8.simple.html2015-04-17 17:41 2.3KBrief HTML: sequence and prediction only
[TXT]jp_CQkxNX8.svg.html2015-04-17 17:52 137KJalview SVG summary of results
[ ]jp_CQkxNX8.tar.gz2015-04-17 17:53 178MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.