A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:44 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d1yfsa1.name | 2015-04-17 16:13 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_sR6vqVQ.align | 2015-04-17 16:44 | 170K | PSIBLAST alignment in FASTA format |
| jp_sR6vqVQ.als | 2015-04-17 16:44 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_sR6vqVQ.blast.gz | 2015-04-17 16:43 | 5.4M | Compressed PSIBLAST output file |
| jp_sR6vqVQ.coils.csv | 2015-04-17 16:44 | 1.3K | COILS output in CSV format |
| jp_sR6vqVQ.coilseq.lupas_14 | 2015-04-17 16:44 | 8.9K | COILS output, window length 14 |
| jp_sR6vqVQ.coilseq.lupas_21 | 2015-04-17 16:44 | 8.9K | COILS output, window length 21 |
| jp_sR6vqVQ.coilseq.lupas_28 | 2015-04-17 16:44 | 8.9K | COILS output, window length 28 |
| jp_sR6vqVQ.concise | 2015-04-17 16:44 | 338K | Prediction: coiled-coil, solvent, alignment |
| jp_sR6vqVQ.concise.blc | 2015-04-17 16:44 | 171K | BLC format prediction and alignment data |
| jp_sR6vqVQ.concise.fasta | 2015-04-17 16:44 | 172K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_sR6vqVQ.concise.pdf | 2015-04-17 16:44 | 1.1M | PDF prediction and alignment data |
| jp_sR6vqVQ.concise.ps | 2015-04-17 16:44 | 21M | Prediction: coiled-coil, solvent, alignment |
| jp_sR6vqVQ.fasta | 2015-04-17 16:39 | 227 | Input query sequence in FASTA format |
| jp_sR6vqVQ.full_MSA.fasta | 2015-04-17 16:43 | 9.7M | Full MSA before JPred filters in FASTA |
| jp_sR6vqVQ.full_MSA.fasta.noGaps.html | 2015-04-17 16:44 | 1.4M | Full MSA before JPred filters in FASTA |
| jp_sR6vqVQ.full_MSA.fasta.withGaps.html | 2015-04-17 16:44 | 26M | Full MSA before JPred filters in FASTA |
| jp_sR6vqVQ.hmm | 2015-04-17 16:44 | 40K | HHMer2 profile of the alignment |
| jp_sR6vqVQ.html | 2015-04-17 16:44 | 335K | HTML prediction and alignment data |
| jp_sR6vqVQ.input | 2015-04-17 16:13 | 219 | Raw input data for analysis |
| jp_sR6vqVQ.jalview | 2015-04-17 16:44 | 5.2K | Jalview annotation file for alignment |
| jp_sR6vqVQ.jnet | 2015-04-17 16:44 | 7.8K | Jnet secondary structure output |
| jp_sR6vqVQ.profile | 2015-04-17 16:42 | 34K | PSIBLAST profile from alignment |
| jp_sR6vqVQ.pssm | 2015-04-17 16:44 | 46K | PSIBLAST PSSM for Jnet |
| jp_sR6vqVQ.results.html | 2016-02-15 12:19 | 93K | JPred results page |
| jp_sR6vqVQ.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_sR6vqVQ.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_sR6vqVQ.seq | 2015-04-17 16:13 | 227 | Sequence data file |
| jp_sR6vqVQ.simple.html | 2015-04-17 16:44 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_sR6vqVQ.svg.html) | jp_sR6vqVQ.svg.html | 2015-04-17 16:44 | 85K | Jalview SVG summary of results |
| jp_sR6vqVQ.tar.gz | 2015-04-17 16:44 | 9.5M | Archive containing complete results |
