JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2a9ua1.name2015-04-17 16:48 0 Job name flag file
[ ]jp_bq4Vx2a.align2015-04-17 17:43 47KPSIBLAST alignment in FASTA format
[TXT]jp_bq4Vx2a.als2015-04-17 17:43 1.9KAlscript command file for PS/PDF output
[ ]jp_bq4Vx2a.blast.gz2015-04-17 17:43 112KCompressed PSIBLAST output file
[TXT]jp_bq4Vx2a.coils.csv2015-04-17 17:43 834 COILS output in CSV format
[ ]jp_bq4Vx2a.coilseq.lupas_142015-04-17 17:43 5.6KCOILS output, window length 14
[ ]jp_bq4Vx2a.coilseq.lupas_212015-04-17 17:43 5.6KCOILS output, window length 21
[ ]jp_bq4Vx2a.coilseq.lupas_282015-04-17 17:43 5.6KCOILS output, window length 28
[ ]jp_bq4Vx2a.concise2015-04-17 17:43 95KPrediction: coiled-coil, solvent, alignment
[ ]jp_bq4Vx2a.concise.blc2015-04-17 17:43 48KBLC format prediction and alignment data
[ ]jp_bq4Vx2a.concise.fasta2015-04-17 17:43 48KPrediction: coiled-coil, solvent, alignment
[ ]jp_bq4Vx2a.concise.pdf2015-04-17 17:43 294KPDF prediction and alignment data
[ ]jp_bq4Vx2a.concise.ps2015-04-17 17:43 5.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_bq4Vx2a.fasta2015-04-17 17:39 148 Input query sequence in FASTA format
[ ]jp_bq4Vx2a.full_MSA.fasta2015-04-17 17:43 338KFull MSA before JPred filters in FASTA
[TXT]jp_bq4Vx2a.full_MSA.fasta.noGaps.html2015-04-17 17:43 137KFull MSA before JPred filters in FASTA
[TXT]jp_bq4Vx2a.full_MSA.fasta.withGaps.html2015-04-17 17:43 1.5MFull MSA before JPred filters in FASTA
[ ]jp_bq4Vx2a.hmm2015-04-17 17:43 25KHHMer2 profile of the alignment
[TXT]jp_bq4Vx2a.html2015-04-17 17:43 123KHTML prediction and alignment data
[ ]jp_bq4Vx2a.input2015-04-17 16:48 141 Raw input data for analysis
[ ]jp_bq4Vx2a.jalview2015-04-17 17:43 3.6KJalview annotation file for alignment
[ ]jp_bq4Vx2a.jnet2015-04-17 17:43 5.0KJnet secondary structure output
[TXT]jp_bq4Vx2a.profile2015-04-17 17:42 22KPSIBLAST profile from alignment
[ ]jp_bq4Vx2a.pssm2015-04-17 17:43 29KPSIBLAST PSSM for Jnet
[TXT]jp_bq4Vx2a.results.html2016-02-15 12:19 61KJPred results page
[TXT]jp_bq4Vx2a.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_bq4Vx2a.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_bq4Vx2a.seq2015-04-17 16:48 148 Sequence data file
[TXT]jp_bq4Vx2a.simple.html2015-04-17 17:43 1.2KBrief HTML: sequence and prediction only
[TXT]jp_bq4Vx2a.svg.html2015-04-17 17:43 53KJalview SVG summary of results
[ ]jp_bq4Vx2a.tar.gz2015-04-17 17:43 623KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.