JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2b59b2.name2015-04-17 19:17 0 Job name flag file
[ ]jp_3JWdWzE.align2015-04-17 21:50 116KPSIBLAST alignment in FASTA format
[TXT]jp_3JWdWzE.als2015-04-17 21:50 2.5KAlscript command file for PS/PDF output
[ ]jp_3JWdWzE.blast.gz2015-04-17 21:49 1.6MCompressed PSIBLAST output file
[TXT]jp_3JWdWzE.coils.csv2015-04-17 21:50 606 COILS output in CSV format
[ ]jp_3JWdWzE.coilseq.lupas_142015-04-17 21:50 4.0KCOILS output, window length 14
[ ]jp_3JWdWzE.coilseq.lupas_212015-04-17 21:50 4.0KCOILS output, window length 21
[ ]jp_3JWdWzE.coilseq.lupas_282015-04-17 21:50 4.0KCOILS output, window length 28
[ ]jp_3JWdWzE.concise2015-04-17 21:50 222KPrediction: coiled-coil, solvent, alignment
[ ]jp_3JWdWzE.concise.blc2015-04-17 21:50 115KBLC format prediction and alignment data
[ ]jp_3JWdWzE.concise.fasta2015-04-17 21:50 117KPrediction: coiled-coil, solvent, alignment
[ ]jp_3JWdWzE.concise.pdf2015-04-17 21:50 670KPDF prediction and alignment data
[ ]jp_3JWdWzE.concise.ps2015-04-17 21:50 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_3JWdWzE.fasta2015-04-17 21:44 110 Input query sequence in FASTA format
[ ]jp_3JWdWzE.full_MSA.fasta2015-04-17 21:50 6.9MFull MSA before JPred filters in FASTA
[TXT]jp_3JWdWzE.full_MSA.fasta.noGaps.html2015-04-17 21:50 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_3JWdWzE.full_MSA.fasta.withGaps.html2015-04-17 21:50 28MFull MSA before JPred filters in FASTA
[ ]jp_3JWdWzE.hmm2015-04-17 21:50 18KHHMer2 profile of the alignment
[TXT]jp_3JWdWzE.html2015-04-17 21:50 320KHTML prediction and alignment data
[ ]jp_3JWdWzE.input2015-04-17 19:17 103 Raw input data for analysis
[ ]jp_3JWdWzE.jalview2015-04-17 21:50 2.8KJalview annotation file for alignment
[ ]jp_3JWdWzE.jnet2015-04-17 21:50 3.6KJnet secondary structure output
[TXT]jp_3JWdWzE.profile2015-04-17 21:46 16KPSIBLAST profile from alignment
[ ]jp_3JWdWzE.pssm2015-04-17 21:50 21KPSIBLAST PSSM for Jnet
[TXT]jp_3JWdWzE.results.html2016-02-15 12:19 48KJPred results page
[TXT]jp_3JWdWzE.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_3JWdWzE.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_3JWdWzE.seq2015-04-17 19:17 110 Sequence data file
[TXT]jp_3JWdWzE.simple.html2015-04-17 21:50 1.2KBrief HTML: sequence and prediction only
[TXT]jp_3JWdWzE.svg.html2015-04-17 21:51 40KJalview SVG summary of results
[ ]jp_3JWdWzE.tar.gz2015-04-17 21:51 5.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.