JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:52 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c6qa_.name2015-04-17 18:04 0 Job name flag file
[ ]jp_meZM6m9.align2015-04-17 19:51 168KPSIBLAST alignment in FASTA format
[TXT]jp_meZM6m9.als2015-04-17 19:51 5.7KAlscript command file for PS/PDF output
[ ]jp_meZM6m9.blast.gz2015-04-17 19:49 11MCompressed PSIBLAST output file
[TXT]jp_meZM6m9.coils.csv2015-04-17 19:51 2.0KCOILS output in CSV format
[ ]jp_meZM6m9.coilseq.lupas_142015-04-17 19:51 14KCOILS output, window length 14
[ ]jp_meZM6m9.coilseq.lupas_212015-04-17 19:51 14KCOILS output, window length 21
[ ]jp_meZM6m9.coilseq.lupas_282015-04-17 19:51 14KCOILS output, window length 28
[ ]jp_meZM6m9.concise2015-04-17 19:51 340KPrediction: coiled-coil, solvent, alignment
[ ]jp_meZM6m9.concise.blc2015-04-17 19:51 170KBLC format prediction and alignment data
[ ]jp_meZM6m9.concise.fasta2015-04-17 19:51 171KPrediction: coiled-coil, solvent, alignment
[ ]jp_meZM6m9.concise.pdf2015-04-17 19:52 1.1MPDF prediction and alignment data
[ ]jp_meZM6m9.concise.ps2015-04-17 19:51 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_meZM6m9.fasta2015-04-17 19:42 345 Input query sequence in FASTA format
[ ]jp_meZM6m9.full_MSA.fasta2015-04-17 19:51 30MFull MSA before JPred filters in FASTA
[TXT]jp_meZM6m9.full_MSA.fasta.noGaps.html2015-04-17 19:52 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_meZM6m9.full_MSA.fasta.withGaps.html2015-04-17 19:52 73MFull MSA before JPred filters in FASTA
[ ]jp_meZM6m9.hmm2015-04-17 19:51 62KHHMer2 profile of the alignment
[TXT]jp_meZM6m9.html2015-04-17 19:51 289KHTML prediction and alignment data
[ ]jp_meZM6m9.input2015-04-17 18:04 335 Raw input data for analysis
[ ]jp_meZM6m9.jalview2015-04-17 19:51 7.4KJalview annotation file for alignment
[ ]jp_meZM6m9.jnet2015-04-17 19:51 12KJnet secondary structure output
[TXT]jp_meZM6m9.profile2015-04-17 19:47 52KPSIBLAST profile from alignment
[ ]jp_meZM6m9.pssm2015-04-17 19:51 70KPSIBLAST PSSM for Jnet
[TXT]jp_meZM6m9.results.html2016-02-15 12:19 146KJPred results page
[TXT]jp_meZM6m9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_meZM6m9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_meZM6m9.seq2015-04-17 18:04 345 Sequence data file
[TXT]jp_meZM6m9.simple.html2015-04-17 19:51 2.3KBrief HTML: sequence and prediction only
[TXT]jp_meZM6m9.svg.html2015-04-17 19:52 138KJalview SVG summary of results
[ ]jp_meZM6m9.tar.gz2015-04-17 19:52 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.