JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:45 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2c78a1.name2015-04-17 17:31 0 Job name flag file
[ ]jp_QAKpf7N.align2015-04-17 19:44 67KPSIBLAST alignment in FASTA format
[TXT]jp_QAKpf7N.als2015-04-17 19:44 2.3KAlscript command file for PS/PDF output
[ ]jp_QAKpf7N.blast.gz2015-04-17 19:43 2.6MCompressed PSIBLAST output file
[TXT]jp_QAKpf7N.coils.csv2015-04-17 19:44 630 COILS output in CSV format
[ ]jp_QAKpf7N.coilseq.lupas_142015-04-17 19:44 4.2KCOILS output, window length 14
[ ]jp_QAKpf7N.coilseq.lupas_212015-04-17 19:44 4.2KCOILS output, window length 21
[ ]jp_QAKpf7N.coilseq.lupas_282015-04-17 19:44 4.2KCOILS output, window length 28
[ ]jp_QAKpf7N.concise2015-04-17 19:44 131KPrediction: coiled-coil, solvent, alignment
[ ]jp_QAKpf7N.concise.blc2015-04-17 19:44 67KBLC format prediction and alignment data
[ ]jp_QAKpf7N.concise.fasta2015-04-17 19:44 68KPrediction: coiled-coil, solvent, alignment
[ ]jp_QAKpf7N.concise.pdf2015-04-17 19:45 453KPDF prediction and alignment data
[ ]jp_QAKpf7N.concise.ps2015-04-17 19:44 7.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_QAKpf7N.fasta2015-04-17 18:46 114 Input query sequence in FASTA format
[ ]jp_QAKpf7N.full_MSA.fasta2015-04-17 19:44 4.5MFull MSA before JPred filters in FASTA
[TXT]jp_QAKpf7N.full_MSA.fasta.noGaps.html2015-04-17 19:45 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_QAKpf7N.full_MSA.fasta.withGaps.html2015-04-17 19:45 19MFull MSA before JPred filters in FASTA
[ ]jp_QAKpf7N.hmm2015-04-17 19:44 19KHHMer2 profile of the alignment
[TXT]jp_QAKpf7N.html2015-04-17 19:44 186KHTML prediction and alignment data
[ ]jp_QAKpf7N.input2015-04-17 17:31 107 Raw input data for analysis
[ ]jp_QAKpf7N.jalview2015-04-17 19:44 2.8KJalview annotation file for alignment
[ ]jp_QAKpf7N.jnet2015-04-17 19:44 3.7KJnet secondary structure output
[TXT]jp_QAKpf7N.profile2015-04-17 19:20 16KPSIBLAST profile from alignment
[ ]jp_QAKpf7N.pssm2015-04-17 19:44 21KPSIBLAST PSSM for Jnet
[TXT]jp_QAKpf7N.results.html2016-02-15 12:19 50KJPred results page
[TXT]jp_QAKpf7N.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_QAKpf7N.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_QAKpf7N.seq2015-04-17 17:31 114 Sequence data file
[TXT]jp_QAKpf7N.simple.html2015-04-17 19:44 1.3KBrief HTML: sequence and prediction only
[TXT]jp_QAKpf7N.svg.html2015-04-17 19:45 42KJalview SVG summary of results
[ ]jp_QAKpf7N.tar.gz2015-04-17 19:45 4.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.