JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:55 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2cara1.name2015-04-17 18:04 0 Job name flag file
[ ]jp_GxBzdGs.align2015-04-17 19:53 205KPSIBLAST alignment in FASTA format
[TXT]jp_GxBzdGs.als2015-04-17 19:53 3.1KAlscript command file for PS/PDF output
[ ]jp_GxBzdGs.blast.gz2015-04-17 19:51 5.6MCompressed PSIBLAST output file
[TXT]jp_GxBzdGs.coils.csv2015-04-17 19:53 1.2KCOILS output in CSV format
[ ]jp_GxBzdGs.coilseq.lupas_142015-04-17 19:53 8.1KCOILS output, window length 14
[ ]jp_GxBzdGs.coilseq.lupas_212015-04-17 19:53 8.1KCOILS output, window length 21
[ ]jp_GxBzdGs.coilseq.lupas_282015-04-17 19:53 8.1KCOILS output, window length 28
[ ]jp_GxBzdGs.concise2015-04-17 19:53 403KPrediction: coiled-coil, solvent, alignment
[ ]jp_GxBzdGs.concise.blc2015-04-17 19:53 205KBLC format prediction and alignment data
[ ]jp_GxBzdGs.concise.fasta2015-04-17 19:53 207KPrediction: coiled-coil, solvent, alignment
[ ]jp_GxBzdGs.concise.pdf2015-04-17 19:54 1.4MPDF prediction and alignment data
[ ]jp_GxBzdGs.concise.ps2015-04-17 19:53 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_GxBzdGs.fasta2015-04-17 19:43 209 Input query sequence in FASTA format
[ ]jp_GxBzdGs.full_MSA.fasta2015-04-17 19:52 11MFull MSA before JPred filters in FASTA
[TXT]jp_GxBzdGs.full_MSA.fasta.noGaps.html2015-04-17 19:54 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_GxBzdGs.full_MSA.fasta.withGaps.html2015-04-17 19:54 30MFull MSA before JPred filters in FASTA
[ ]jp_GxBzdGs.hmm2015-04-17 19:53 36KHHMer2 profile of the alignment
[TXT]jp_GxBzdGs.html2015-04-17 19:53 409KHTML prediction and alignment data
[ ]jp_GxBzdGs.input2015-04-17 18:04 201 Raw input data for analysis
[ ]jp_GxBzdGs.jalview2015-04-17 19:53 4.7KJalview annotation file for alignment
[ ]jp_GxBzdGs.jnet2015-04-17 19:53 7.1KJnet secondary structure output
[TXT]jp_GxBzdGs.profile2015-04-17 19:50 31KPSIBLAST profile from alignment
[ ]jp_GxBzdGs.pssm2015-04-17 19:53 42KPSIBLAST PSSM for Jnet
[TXT]jp_GxBzdGs.results.html2016-02-15 12:19 87KJPred results page
[TXT]jp_GxBzdGs.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GxBzdGs.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GxBzdGs.seq2015-04-17 18:04 209 Sequence data file
[TXT]jp_GxBzdGs.simple.html2015-04-17 19:53 1.6KBrief HTML: sequence and prediction only
[TXT]jp_GxBzdGs.svg.html2015-04-17 19:54 79KJalview SVG summary of results
[ ]jp_GxBzdGs.tar.gz2015-04-17 19:55 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.