A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:50 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d2cwya1.name | 2015-04-17 16:50 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_jIeoAIq.align | 2015-04-17 17:49 | 73K | PSIBLAST alignment in FASTA format |
| jp_jIeoAIq.als | 2015-04-17 17:49 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_jIeoAIq.blast.gz | 2015-04-17 17:49 | 220K | Compressed PSIBLAST output file |
| jp_jIeoAIq.coils.csv | 2015-04-17 17:49 | 594 | COILS output in CSV format |
| jp_jIeoAIq.coilseq.lupas_14 | 2015-04-17 17:49 | 3.9K | COILS output, window length 14 |
| jp_jIeoAIq.coilseq.lupas_21 | 2015-04-17 17:49 | 3.9K | COILS output, window length 21 |
| jp_jIeoAIq.coilseq.lupas_28 | 2015-04-17 17:49 | 3.9K | COILS output, window length 28 |
| jp_jIeoAIq.concise | 2015-04-17 17:49 | 140K | Prediction: coiled-coil, solvent, alignment |
| jp_jIeoAIq.concise.blc | 2015-04-17 17:49 | 73K | BLC format prediction and alignment data |
| jp_jIeoAIq.concise.fasta | 2015-04-17 17:49 | 74K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_jIeoAIq.concise.pdf | 2015-04-17 17:49 | 467K | PDF prediction and alignment data |
| jp_jIeoAIq.concise.ps | 2015-04-17 17:49 | 8.1M | Prediction: coiled-coil, solvent, alignment |
| jp_jIeoAIq.fasta | 2015-04-17 17:43 | 108 | Input query sequence in FASTA format |
| jp_jIeoAIq.full_MSA.fasta | 2015-04-17 17:49 | 347K | Full MSA before JPred filters in FASTA |
| jp_jIeoAIq.full_MSA.fasta.noGaps.html | 2015-04-17 17:49 | 209K | Full MSA before JPred filters in FASTA |
| jp_jIeoAIq.full_MSA.fasta.withGaps.html | 2015-04-17 17:49 | 1.7M | Full MSA before JPred filters in FASTA |
| jp_jIeoAIq.hmm | 2015-04-17 17:49 | 18K | HHMer2 profile of the alignment |
| jp_jIeoAIq.html | 2015-04-17 17:49 | 209K | HTML prediction and alignment data |
| jp_jIeoAIq.input | 2015-04-17 16:50 | 101 | Raw input data for analysis |
| jp_jIeoAIq.jalview | 2015-04-17 17:49 | 2.7K | Jalview annotation file for alignment |
| jp_jIeoAIq.jnet | 2015-04-17 17:49 | 3.5K | Jnet secondary structure output |
| jp_jIeoAIq.profile | 2015-04-17 17:47 | 15K | PSIBLAST profile from alignment |
| jp_jIeoAIq.pssm | 2015-04-17 17:49 | 20K | PSIBLAST PSSM for Jnet |
| jp_jIeoAIq.results.html | 2016-02-15 12:19 | 47K | JPred results page |
| jp_jIeoAIq.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_jIeoAIq.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_jIeoAIq.seq | 2015-04-17 16:50 | 108 | Sequence data file |
| jp_jIeoAIq.simple.html | 2015-04-17 17:49 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_jIeoAIq.svg.html) | jp_jIeoAIq.svg.html | 2015-04-17 17:49 | 39K | Jalview SVG summary of results |
| jp_jIeoAIq.tar.gz | 2015-04-17 17:50 | 1.0M | Archive containing complete results |
