JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2czvc1.name2015-04-17 19:18 0 Job name flag file
[ ]jp_7PQ3LG9.align2015-04-17 21:50 69KPSIBLAST alignment in FASTA format
[TXT]jp_7PQ3LG9.als2015-04-17 21:50 2.2KAlscript command file for PS/PDF output
[ ]jp_7PQ3LG9.blast.gz2015-04-17 21:50 329KCompressed PSIBLAST output file
[TXT]jp_7PQ3LG9.coils.csv2015-04-17 21:50 738 COILS output in CSV format
[ ]jp_7PQ3LG9.coilseq.lupas_142015-04-17 21:50 5.0KCOILS output, window length 14
[ ]jp_7PQ3LG9.coilseq.lupas_212015-04-17 21:50 5.0KCOILS output, window length 21
[ ]jp_7PQ3LG9.coilseq.lupas_282015-04-17 21:50 5.0KCOILS output, window length 28
[ ]jp_7PQ3LG9.concise2015-04-17 21:50 136KPrediction: coiled-coil, solvent, alignment
[ ]jp_7PQ3LG9.concise.blc2015-04-17 21:50 70KBLC format prediction and alignment data
[ ]jp_7PQ3LG9.concise.fasta2015-04-17 21:50 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_7PQ3LG9.concise.pdf2015-04-17 21:50 457KPDF prediction and alignment data
[ ]jp_7PQ3LG9.concise.ps2015-04-17 21:50 8.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_7PQ3LG9.fasta2015-04-17 21:46 132 Input query sequence in FASTA format
[ ]jp_7PQ3LG9.full_MSA.fasta2015-04-17 21:50 785KFull MSA before JPred filters in FASTA
[TXT]jp_7PQ3LG9.full_MSA.fasta.noGaps.html2015-04-17 21:50 178KFull MSA before JPred filters in FASTA
[TXT]jp_7PQ3LG9.full_MSA.fasta.withGaps.html2015-04-17 21:50 2.2MFull MSA before JPred filters in FASTA
[ ]jp_7PQ3LG9.hmm2015-04-17 21:50 22KHHMer2 profile of the alignment
[TXT]jp_7PQ3LG9.html2015-04-17 21:50 181KHTML prediction and alignment data
[ ]jp_7PQ3LG9.input2015-04-17 19:18 125 Raw input data for analysis
[ ]jp_7PQ3LG9.jalview2015-04-17 21:50 3.2KJalview annotation file for alignment
[ ]jp_7PQ3LG9.jnet2015-04-17 21:50 4.4KJnet secondary structure output
[TXT]jp_7PQ3LG9.profile2015-04-17 21:49 19KPSIBLAST profile from alignment
[ ]jp_7PQ3LG9.pssm2015-04-17 21:50 25KPSIBLAST PSSM for Jnet
[TXT]jp_7PQ3LG9.results.html2016-02-15 12:19 56KJPred results page
[TXT]jp_7PQ3LG9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7PQ3LG9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7PQ3LG9.seq2015-04-17 19:18 132 Sequence data file
[TXT]jp_7PQ3LG9.simple.html2015-04-17 21:50 1.3KBrief HTML: sequence and prediction only
[TXT]jp_7PQ3LG9.svg.html2015-04-17 21:50 48KJalview SVG summary of results
[ ]jp_7PQ3LG9.tar.gz2015-04-17 21:51 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.