JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:48 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2dewx1.name2015-04-17 18:04 0 Job name flag file
[ ]jp_3eyQ1MH.align2015-04-17 19:48 34KPSIBLAST alignment in FASTA format
[TXT]jp_3eyQ1MH.als2015-04-17 19:48 2.8KAlscript command file for PS/PDF output
[ ]jp_3eyQ1MH.blast.gz2015-04-17 19:48 151KCompressed PSIBLAST output file
[TXT]jp_3eyQ1MH.coils.csv2015-04-17 19:48 1.0KCOILS output in CSV format
[ ]jp_3eyQ1MH.coilseq.lupas_142015-04-17 19:48 6.9KCOILS output, window length 14
[ ]jp_3eyQ1MH.coilseq.lupas_212015-04-17 19:48 6.9KCOILS output, window length 21
[ ]jp_3eyQ1MH.coilseq.lupas_282015-04-17 19:48 6.9KCOILS output, window length 28
[ ]jp_3eyQ1MH.concise2015-04-17 19:48 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_3eyQ1MH.concise.blc2015-04-17 19:48 36KBLC format prediction and alignment data
[ ]jp_3eyQ1MH.concise.fasta2015-04-17 19:48 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_3eyQ1MH.concise.pdf2015-04-17 19:48 236KPDF prediction and alignment data
[ ]jp_3eyQ1MH.concise.ps2015-04-17 19:48 4.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_3eyQ1MH.fasta2015-04-17 19:43 180 Input query sequence in FASTA format
[ ]jp_3eyQ1MH.full_MSA.fasta2015-04-17 19:48 259KFull MSA before JPred filters in FASTA
[TXT]jp_3eyQ1MH.full_MSA.fasta.noGaps.html2015-04-17 19:48 103KFull MSA before JPred filters in FASTA
[TXT]jp_3eyQ1MH.full_MSA.fasta.withGaps.html2015-04-17 19:48 1.0MFull MSA before JPred filters in FASTA
[ ]jp_3eyQ1MH.hmm2015-04-17 19:48 31KHHMer2 profile of the alignment
[TXT]jp_3eyQ1MH.html2015-04-17 19:48 83KHTML prediction and alignment data
[ ]jp_3eyQ1MH.input2015-04-17 18:04 172 Raw input data for analysis
[ ]jp_3eyQ1MH.jalview2015-04-17 19:48 4.0KJalview annotation file for alignment
[ ]jp_3eyQ1MH.jnet2015-04-17 19:48 6.1KJnet secondary structure output
[TXT]jp_3eyQ1MH.profile2015-04-17 19:46 27KPSIBLAST profile from alignment
[ ]jp_3eyQ1MH.pssm2015-04-17 19:48 35KPSIBLAST PSSM for Jnet
[TXT]jp_3eyQ1MH.results.html2016-02-15 12:19 73KJPred results page
[TXT]jp_3eyQ1MH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_3eyQ1MH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_3eyQ1MH.seq2015-04-17 18:04 180 Sequence data file
[TXT]jp_3eyQ1MH.simple.html2015-04-17 19:48 1.5KBrief HTML: sequence and prediction only
[TXT]jp_3eyQ1MH.svg.html2015-04-17 19:48 65KJalview SVG summary of results
[ ]jp_3eyQ1MH.tar.gz2015-04-17 19:48 551KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.