JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:04 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2eiya_.name2015-04-17 17:35 0 Job name flag file
[ ]jp_b24Z1cz.align2015-04-17 19:03 291KPSIBLAST alignment in FASTA format
[TXT]jp_b24Z1cz.als2015-04-17 19:03 5.0KAlscript command file for PS/PDF output
[ ]jp_b24Z1cz.blast.gz2015-04-17 19:01 15MCompressed PSIBLAST output file
[TXT]jp_b24Z1cz.coils.csv2015-04-17 19:03 1.8KCOILS output in CSV format
[ ]jp_b24Z1cz.coilseq.lupas_142015-04-17 19:03 12KCOILS output, window length 14
[ ]jp_b24Z1cz.coilseq.lupas_212015-04-17 19:03 12KCOILS output, window length 21
[ ]jp_b24Z1cz.coilseq.lupas_282015-04-17 19:03 12KCOILS output, window length 28
[ ]jp_b24Z1cz.concise2015-04-17 19:03 576KPrediction: coiled-coil, solvent, alignment
[ ]jp_b24Z1cz.concise.blc2015-04-17 19:03 291KBLC format prediction and alignment data
[ ]jp_b24Z1cz.concise.fasta2015-04-17 19:03 294KPrediction: coiled-coil, solvent, alignment
[ ]jp_b24Z1cz.concise.pdf2015-04-17 19:03 2.1MPDF prediction and alignment data
[ ]jp_b24Z1cz.concise.ps2015-04-17 19:03 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_b24Z1cz.fasta2015-04-17 18:52 314 Input query sequence in FASTA format
[ ]jp_b24Z1cz.full_MSA.fasta2015-04-17 19:02 25MFull MSA before JPred filters in FASTA
[TXT]jp_b24Z1cz.full_MSA.fasta.noGaps.html2015-04-17 19:04 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_b24Z1cz.full_MSA.fasta.withGaps.html2015-04-17 19:04 76MFull MSA before JPred filters in FASTA
[ ]jp_b24Z1cz.hmm2015-04-17 19:03 56KHHMer2 profile of the alignment
[TXT]jp_b24Z1cz.html2015-04-17 19:03 494KHTML prediction and alignment data
[ ]jp_b24Z1cz.input2015-04-17 17:35 304 Raw input data for analysis
[ ]jp_b24Z1cz.jalview2015-04-17 19:03 6.8KJalview annotation file for alignment
[ ]jp_b24Z1cz.jnet2015-04-17 19:03 11KJnet secondary structure output
[TXT]jp_b24Z1cz.profile2015-04-17 18:59 47KPSIBLAST profile from alignment
[ ]jp_b24Z1cz.pssm2015-04-17 19:03 64KPSIBLAST PSSM for Jnet
[TXT]jp_b24Z1cz.results.html2016-02-15 12:19 130KJPred results page
[TXT]jp_b24Z1cz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_b24Z1cz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_b24Z1cz.seq2015-04-17 17:35 314 Sequence data file
[TXT]jp_b24Z1cz.simple.html2015-04-17 19:03 2.1KBrief HTML: sequence and prediction only
[TXT]jp_b24Z1cz.svg.html2015-04-17 19:04 122KJalview SVG summary of results
[ ]jp_b24Z1cz.tar.gz2015-04-17 19:04 26MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.