JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:45 5.0KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2erla_.name2015-04-17 16:51 0 Job name flag file
[ ]jp_zVoPnKN.align2015-04-17 17:45 106 PSIBLAST alignment in FASTA format
[TXT]jp_zVoPnKN.als2015-04-17 17:45 1.4KAlscript command file for PS/PDF output
[ ]jp_zVoPnKN.blast.gz2015-04-17 17:45 1.5KCompressed PSIBLAST output file
[TXT]jp_zVoPnKN.coils.csv2015-04-17 17:45 270 COILS output in CSV format
[ ]jp_zVoPnKN.coilseq.lupas_142015-04-17 17:45 1.7KCOILS output, window length 14
[ ]jp_zVoPnKN.coilseq.lupas_212015-04-17 17:45 1.7KCOILS output, window length 21
[ ]jp_zVoPnKN.coilseq.lupas_282015-04-17 17:45 1.7KCOILS output, window length 28
[ ]jp_zVoPnKN.concise2015-04-17 17:45 2.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_zVoPnKN.concise.blc2015-04-17 17:45 801 BLC format prediction and alignment data
[ ]jp_zVoPnKN.concise.fasta2015-04-17 17:45 616 Prediction: coiled-coil, solvent, alignment
[ ]jp_zVoPnKN.concise.pdf2015-04-17 17:45 6.4KPDF prediction and alignment data
[ ]jp_zVoPnKN.concise.ps2015-04-17 17:45 80KPrediction: coiled-coil, solvent, alignment
[ ]jp_zVoPnKN.fasta2015-04-17 17:44 53 Input query sequence in FASTA format
[ ]jp_zVoPnKN.full_MSA.fasta2015-04-17 17:45 106 Full MSA before JPred filters in FASTA
[TXT]jp_zVoPnKN.full_MSA.fasta.noGaps.html2015-04-17 17:45 454 Full MSA before JPred filters in FASTA
[TXT]jp_zVoPnKN.full_MSA.fasta.withGaps.html2015-04-17 17:45 454 Full MSA before JPred filters in FASTA
[ ]jp_zVoPnKN.hmm2015-04-17 17:45 7.5KHHMer2 profile of the alignment
[TXT]jp_zVoPnKN.html2015-04-17 17:45 6.0KHTML prediction and alignment data
[ ]jp_zVoPnKN.input2015-04-17 16:51 47 Raw input data for analysis
[ ]jp_zVoPnKN.jalview2015-04-17 17:45 1.6KJalview annotation file for alignment
[ ]jp_zVoPnKN.jnet2015-04-17 17:45 1.6KJnet secondary structure output
[TXT]jp_zVoPnKN.profile2015-04-17 17:45 7.0KPSIBLAST profile from alignment
[ ]jp_zVoPnKN.pssm2015-04-17 17:45 8.6KPSIBLAST PSSM for Jnet
[TXT]jp_zVoPnKN.results.html2016-02-15 12:19 26KJPred results page
[TXT]jp_zVoPnKN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zVoPnKN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zVoPnKN.seq2015-04-17 16:51 53 Sequence data file
[TXT]jp_zVoPnKN.simple.html2015-04-17 17:45 1.0KBrief HTML: sequence and prediction only
[TXT]jp_zVoPnKN.svg.html2015-04-17 17:45 18KJalview SVG summary of results
[ ]jp_zVoPnKN.tar.gz2015-04-17 17:45 20KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.