JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:51 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2es4d1.name2015-04-17 18:05 0 Job name flag file
[ ]jp_4NHk89r.align2015-04-17 19:51 69KPSIBLAST alignment in FASTA format
[TXT]jp_4NHk89r.als2015-04-17 19:51 3.0KAlscript command file for PS/PDF output
[ ]jp_4NHk89r.blast.gz2015-04-17 19:51 223KCompressed PSIBLAST output file
[TXT]jp_4NHk89r.coils.csv2015-04-17 19:51 1.6KCOILS output in CSV format
[ ]jp_4NHk89r.coilseq.lupas_142015-04-17 19:51 11KCOILS output, window length 14
[ ]jp_4NHk89r.coilseq.lupas_212015-04-17 19:51 11KCOILS output, window length 21
[ ]jp_4NHk89r.coilseq.lupas_282015-04-17 19:51 11KCOILS output, window length 28
[ ]jp_4NHk89r.concise2015-04-17 19:51 144KPrediction: coiled-coil, solvent, alignment
[ ]jp_4NHk89r.concise.blc2015-04-17 19:51 72KBLC format prediction and alignment data
[ ]jp_4NHk89r.concise.fasta2015-04-17 19:51 71KPrediction: coiled-coil, solvent, alignment
[ ]jp_4NHk89r.concise.pdf2015-04-17 19:51 471KPDF prediction and alignment data
[ ]jp_4NHk89r.concise.ps2015-04-17 19:51 8.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_4NHk89r.fasta2015-04-17 19:44 286 Input query sequence in FASTA format
[ ]jp_4NHk89r.full_MSA.fasta2015-04-17 19:51 320KFull MSA before JPred filters in FASTA
[TXT]jp_4NHk89r.full_MSA.fasta.noGaps.html2015-04-17 19:51 129KFull MSA before JPred filters in FASTA
[TXT]jp_4NHk89r.full_MSA.fasta.withGaps.html2015-04-17 19:51 1.4MFull MSA before JPred filters in FASTA
[ ]jp_4NHk89r.hmm2015-04-17 19:51 51KHHMer2 profile of the alignment
[TXT]jp_4NHk89r.html2015-04-17 19:51 143KHTML prediction and alignment data
[ ]jp_4NHk89r.input2015-04-17 18:05 277 Raw input data for analysis
[ ]jp_4NHk89r.jalview2015-04-17 19:51 6.4KJalview annotation file for alignment
[ ]jp_4NHk89r.jnet2015-04-17 19:51 9.9KJnet secondary structure output
[TXT]jp_4NHk89r.profile2015-04-17 19:48 43KPSIBLAST profile from alignment
[ ]jp_4NHk89r.pssm2015-04-17 19:51 58KPSIBLAST PSSM for Jnet
[TXT]jp_4NHk89r.results.html2016-02-15 12:19 114KJPred results page
[TXT]jp_4NHk89r.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_4NHk89r.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_4NHk89r.seq2015-04-17 18:05 286 Sequence data file
[TXT]jp_4NHk89r.simple.html2015-04-17 19:51 1.7KBrief HTML: sequence and prediction only
[TXT]jp_4NHk89r.svg.html2015-04-17 19:51 106KJalview SVG summary of results
[ ]jp_4NHk89r.tar.gz2015-04-17 19:51 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.