JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:48 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2es9a1.name2015-04-17 18:05 0 Job name flag file
[ ]jp_vqWwvqD.align2015-04-17 19:48 5.2KPSIBLAST alignment in FASTA format
[TXT]jp_vqWwvqD.als2015-04-17 19:48 2.0KAlscript command file for PS/PDF output
[ ]jp_vqWwvqD.blast.gz2015-04-17 19:48 8.9KCompressed PSIBLAST output file
[TXT]jp_vqWwvqD.coils.csv2015-04-17 19:48 612 COILS output in CSV format
[ ]jp_vqWwvqD.coilseq.lupas_142015-04-17 19:48 4.1KCOILS output, window length 14
[ ]jp_vqWwvqD.coilseq.lupas_212015-04-17 19:48 4.1KCOILS output, window length 21
[ ]jp_vqWwvqD.coilseq.lupas_282015-04-17 19:48 4.1KCOILS output, window length 28
[ ]jp_vqWwvqD.concise2015-04-17 19:48 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_vqWwvqD.concise.blc2015-04-17 19:48 6.6KBLC format prediction and alignment data
[ ]jp_vqWwvqD.concise.fasta2015-04-17 19:48 6.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_vqWwvqD.concise.pdf2015-04-17 19:48 41KPDF prediction and alignment data
[ ]jp_vqWwvqD.concise.ps2015-04-17 19:48 741KPrediction: coiled-coil, solvent, alignment
[ ]jp_vqWwvqD.fasta2015-04-17 19:44 111 Input query sequence in FASTA format
[ ]jp_vqWwvqD.full_MSA.fasta2015-04-17 19:48 8.5KFull MSA before JPred filters in FASTA
[TXT]jp_vqWwvqD.full_MSA.fasta.noGaps.html2015-04-17 19:48 15KFull MSA before JPred filters in FASTA
[TXT]jp_vqWwvqD.full_MSA.fasta.withGaps.html2015-04-17 19:48 32KFull MSA before JPred filters in FASTA
[ ]jp_vqWwvqD.hmm2015-04-17 19:48 18KHHMer2 profile of the alignment
[TXT]jp_vqWwvqD.html2015-04-17 19:48 25KHTML prediction and alignment data
[ ]jp_vqWwvqD.input2015-04-17 18:05 104 Raw input data for analysis
[ ]jp_vqWwvqD.jalview2015-04-17 19:48 2.8KJalview annotation file for alignment
[ ]jp_vqWwvqD.jnet2015-04-17 19:48 3.6KJnet secondary structure output
[TXT]jp_vqWwvqD.profile2015-04-17 19:47 16KPSIBLAST profile from alignment
[ ]jp_vqWwvqD.pssm2015-04-17 19:48 21KPSIBLAST PSSM for Jnet
[TXT]jp_vqWwvqD.results.html2016-02-15 12:19 49KJPred results page
[TXT]jp_vqWwvqD.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_vqWwvqD.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_vqWwvqD.seq2015-04-17 18:05 111 Sequence data file
[TXT]jp_vqWwvqD.simple.html2015-04-17 19:48 1.2KBrief HTML: sequence and prediction only
[TXT]jp_vqWwvqD.svg.html2015-04-17 19:48 41KJalview SVG summary of results
[ ]jp_vqWwvqD.tar.gz2015-04-17 19:48 91KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.