JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2f4mb_.name2015-04-17 18:05 0 Job name flag file
[ ]jp_WVOqYPZ.align2015-04-17 19:46 16KPSIBLAST alignment in FASTA format
[TXT]jp_WVOqYPZ.als2015-04-17 19:46 1.8KAlscript command file for PS/PDF output
[ ]jp_WVOqYPZ.blast.gz2015-04-17 19:46 103KCompressed PSIBLAST output file
[TXT]jp_WVOqYPZ.coils.csv2015-04-17 19:46 396 COILS output in CSV format
[ ]jp_WVOqYPZ.coilseq.lupas_142015-04-17 19:46 2.6KCOILS output, window length 14
[ ]jp_WVOqYPZ.coilseq.lupas_212015-04-17 19:46 2.6KCOILS output, window length 21
[ ]jp_WVOqYPZ.coilseq.lupas_282015-04-17 19:46 2.6KCOILS output, window length 28
[ ]jp_WVOqYPZ.concise2015-04-17 19:46 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_WVOqYPZ.concise.blc2015-04-17 19:46 17KBLC format prediction and alignment data
[ ]jp_WVOqYPZ.concise.fasta2015-04-17 19:46 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_WVOqYPZ.concise.pdf2015-04-17 19:46 106KPDF prediction and alignment data
[ ]jp_WVOqYPZ.concise.ps2015-04-17 19:46 1.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_WVOqYPZ.fasta2015-04-17 19:44 74 Input query sequence in FASTA format
[ ]jp_WVOqYPZ.full_MSA.fasta2015-04-17 19:46 103KFull MSA before JPred filters in FASTA
[TXT]jp_WVOqYPZ.full_MSA.fasta.noGaps.html2015-04-17 19:46 119KFull MSA before JPred filters in FASTA
[TXT]jp_WVOqYPZ.full_MSA.fasta.withGaps.html2015-04-17 19:46 385KFull MSA before JPred filters in FASTA
[ ]jp_WVOqYPZ.hmm2015-04-17 19:46 11KHHMer2 profile of the alignment
[TXT]jp_WVOqYPZ.html2015-04-17 19:46 65KHTML prediction and alignment data
[ ]jp_WVOqYPZ.input2015-04-17 18:05 68 Raw input data for analysis
[ ]jp_WVOqYPZ.jalview2015-04-17 19:46 2.1KJalview annotation file for alignment
[ ]jp_WVOqYPZ.jnet2015-04-17 19:46 2.3KJnet secondary structure output
[TXT]jp_WVOqYPZ.profile2015-04-17 19:45 10KPSIBLAST profile from alignment
[ ]jp_WVOqYPZ.pssm2015-04-17 19:46 13KPSIBLAST PSSM for Jnet
[TXT]jp_WVOqYPZ.results.html2016-02-15 12:19 36KJPred results page
[TXT]jp_WVOqYPZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WVOqYPZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WVOqYPZ.seq2015-04-17 18:05 74 Sequence data file
[TXT]jp_WVOqYPZ.simple.html2015-04-17 19:46 1.1KBrief HTML: sequence and prediction only
[TXT]jp_WVOqYPZ.svg.html2015-04-17 19:46 28KJalview SVG summary of results
[ ]jp_WVOqYPZ.tar.gz2015-04-17 19:46 294KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.