JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:47 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fcla1.name2015-04-17 18:42 0 Job name flag file
[ ]jp_wRloD_B.align2015-04-17 20:47 102KPSIBLAST alignment in FASTA format
[TXT]jp_wRloD_B.als2015-04-17 20:47 3.1KAlscript command file for PS/PDF output
[ ]jp_wRloD_B.blast.gz2015-04-17 20:46 218KCompressed PSIBLAST output file
[TXT]jp_wRloD_B.coils.csv2015-04-17 20:47 972 COILS output in CSV format
[ ]jp_wRloD_B.coilseq.lupas_142015-04-17 20:47 6.6KCOILS output, window length 14
[ ]jp_wRloD_B.coilseq.lupas_212015-04-17 20:47 6.6KCOILS output, window length 21
[ ]jp_wRloD_B.coilseq.lupas_282015-04-17 20:47 6.6KCOILS output, window length 28
[ ]jp_wRloD_B.concise2015-04-17 20:47 201KPrediction: coiled-coil, solvent, alignment
[ ]jp_wRloD_B.concise.blc2015-04-17 20:47 102KBLC format prediction and alignment data
[ ]jp_wRloD_B.concise.fasta2015-04-17 20:47 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_wRloD_B.concise.pdf2015-04-17 20:47 721KPDF prediction and alignment data
[ ]jp_wRloD_B.concise.ps2015-04-17 20:47 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_wRloD_B.fasta2015-04-17 20:43 172 Input query sequence in FASTA format
[ ]jp_wRloD_B.full_MSA.fasta2015-04-17 20:46 591KFull MSA before JPred filters in FASTA
[TXT]jp_wRloD_B.full_MSA.fasta.noGaps.html2015-04-17 20:47 203KFull MSA before JPred filters in FASTA
[TXT]jp_wRloD_B.full_MSA.fasta.withGaps.html2015-04-17 20:47 2.8MFull MSA before JPred filters in FASTA
[ ]jp_wRloD_B.hmm2015-04-17 20:47 29KHHMer2 profile of the alignment
[TXT]jp_wRloD_B.html2015-04-17 20:47 230KHTML prediction and alignment data
[ ]jp_wRloD_B.input2015-04-17 18:42 164 Raw input data for analysis
[ ]jp_wRloD_B.jalview2015-04-17 20:47 4.0KJalview annotation file for alignment
[ ]jp_wRloD_B.jnet2015-04-17 20:47 5.8KJnet secondary structure output
[TXT]jp_wRloD_B.profile2015-04-17 20:44 25KPSIBLAST profile from alignment
[ ]jp_wRloD_B.pssm2015-04-17 20:47 34KPSIBLAST PSSM for Jnet
[TXT]jp_wRloD_B.results.html2016-02-15 12:19 73KJPred results page
[TXT]jp_wRloD_B.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wRloD_B.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wRloD_B.seq2015-04-17 18:42 172 Sequence data file
[TXT]jp_wRloD_B.simple.html2015-04-17 20:47 1.5KBrief HTML: sequence and prediction only
[TXT]jp_wRloD_B.svg.html2015-04-17 20:47 65KJalview SVG summary of results
[ ]jp_wRloD_B.tar.gz2015-04-17 20:47 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.