JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_WkZgI7h.tar.gz2015-04-17 16:49 133KArchive containing complete results
[TXT]jp_WkZgI7h.svg.html2015-04-17 16:49 41KJalview SVG summary of results
[TXT]jp_WkZgI7h.simple.html2015-04-17 16:49 1.1KBrief HTML: sequence and prediction only
[ ]jp_WkZgI7h.seq2015-04-17 16:18 119 Sequence data file
[TXT]jp_WkZgI7h.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_WkZgI7h.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WkZgI7h.results.html2016-02-15 12:19 50KJPred results page
[ ]jp_WkZgI7h.pssm2015-04-17 16:49 23KPSIBLAST PSSM for Jnet
[TXT]jp_WkZgI7h.profile2015-04-17 16:47 17KPSIBLAST profile from alignment
[ ]jp_WkZgI7h.jnet2015-04-17 16:49 3.9KJnet secondary structure output
[ ]jp_WkZgI7h.jalview2015-04-17 16:49 3.0KJalview annotation file for alignment
[ ]jp_WkZgI7h.input2015-04-17 16:18 112 Raw input data for analysis
[TXT]jp_WkZgI7h.html2015-04-17 16:49 32KHTML prediction and alignment data
[ ]jp_WkZgI7h.hmm2015-04-17 16:49 20KHHMer2 profile of the alignment
[TXT]jp_WkZgI7h.full_MSA.fasta.withGaps.html2015-04-17 16:49 78KFull MSA before JPred filters in FASTA
[TXT]jp_WkZgI7h.full_MSA.fasta.noGaps.html2015-04-17 16:49 35KFull MSA before JPred filters in FASTA
[ ]jp_WkZgI7h.full_MSA.fasta2015-04-17 16:49 21KFull MSA before JPred filters in FASTA
[ ]jp_WkZgI7h.fasta2015-04-17 16:45 119 Input query sequence in FASTA format
[ ]jp_WkZgI7h.concise.ps2015-04-17 16:49 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_WkZgI7h.concise.pdf2015-04-17 16:49 57KPDF prediction and alignment data
[ ]jp_WkZgI7h.concise.fasta2015-04-17 16:49 8.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_WkZgI7h.concise.blc2015-04-17 16:49 9.0KBLC format prediction and alignment data
[ ]jp_WkZgI7h.concise2015-04-17 16:49 19KPrediction: coiled-coil, solvent, alignment
[ ]jp_WkZgI7h.coilseq.lupas_282015-04-17 16:49 4.4KCOILS output, window length 28
[ ]jp_WkZgI7h.coilseq.lupas_212015-04-17 16:49 4.4KCOILS output, window length 21
[ ]jp_WkZgI7h.coilseq.lupas_142015-04-17 16:49 4.4KCOILS output, window length 14
[TXT]jp_WkZgI7h.coils.csv2015-04-17 16:49 660 COILS output in CSV format
[ ]jp_WkZgI7h.blast.gz2015-04-17 16:49 27KCompressed PSIBLAST output file
[TXT]jp_WkZgI7h.als2015-04-17 16:49 1.6KAlscript command file for PS/PDF output
[ ]jp_WkZgI7h.align2015-04-17 16:49 7.5KPSIBLAST alignment in FASTA format
[TXT]d2fcwa1.name2015-04-17 16:18 0 Job name flag file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]LOG2015-04-17 16:49 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.