JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:54 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fgqx_.name2015-04-17 18:42 0 Job name flag file
[ ]jp_OC4BRmQ.align2015-04-17 20:52 315KPSIBLAST alignment in FASTA format
[TXT]jp_OC4BRmQ.als2015-04-17 20:52 4.2KAlscript command file for PS/PDF output
[ ]jp_OC4BRmQ.blast.gz2015-04-17 20:50 12MCompressed PSIBLAST output file
[TXT]jp_OC4BRmQ.coils.csv2015-04-17 20:52 2.0KCOILS output in CSV format
[ ]jp_OC4BRmQ.coilseq.lupas_142015-04-17 20:52 14KCOILS output, window length 14
[ ]jp_OC4BRmQ.coilseq.lupas_212015-04-17 20:52 14KCOILS output, window length 21
[ ]jp_OC4BRmQ.coilseq.lupas_282015-04-17 20:52 14KCOILS output, window length 28
[ ]jp_OC4BRmQ.concise2015-04-17 20:52 626KPrediction: coiled-coil, solvent, alignment
[ ]jp_OC4BRmQ.concise.blc2015-04-17 20:52 315KBLC format prediction and alignment data
[ ]jp_OC4BRmQ.concise.fasta2015-04-17 20:52 318KPrediction: coiled-coil, solvent, alignment
[ ]jp_OC4BRmQ.concise.pdf2015-04-17 20:53 2.1MPDF prediction and alignment data
[ ]jp_OC4BRmQ.concise.ps2015-04-17 20:52 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_OC4BRmQ.fasta2015-04-17 20:43 347 Input query sequence in FASTA format
[ ]jp_OC4BRmQ.full_MSA.fasta2015-04-17 20:51 24MFull MSA before JPred filters in FASTA
[TXT]jp_OC4BRmQ.full_MSA.fasta.noGaps.html2015-04-17 20:53 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_OC4BRmQ.full_MSA.fasta.withGaps.html2015-04-17 20:53 53MFull MSA before JPred filters in FASTA
[ ]jp_OC4BRmQ.hmm2015-04-17 20:52 62KHHMer2 profile of the alignment
[TXT]jp_OC4BRmQ.html2015-04-17 20:52 516KHTML prediction and alignment data
[ ]jp_OC4BRmQ.input2015-04-17 18:42 337 Raw input data for analysis
[ ]jp_OC4BRmQ.jalview2015-04-17 20:52 7.4KJalview annotation file for alignment
[ ]jp_OC4BRmQ.jnet2015-04-17 20:52 12KJnet secondary structure output
[TXT]jp_OC4BRmQ.profile2015-04-17 20:48 53KPSIBLAST profile from alignment
[ ]jp_OC4BRmQ.pssm2015-04-17 20:52 71KPSIBLAST PSSM for Jnet
[TXT]jp_OC4BRmQ.results.html2016-02-15 12:19 136KJPred results page
[TXT]jp_OC4BRmQ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_OC4BRmQ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_OC4BRmQ.seq2015-04-17 18:42 347 Sequence data file
[TXT]jp_OC4BRmQ.simple.html2015-04-17 20:52 2.0KBrief HTML: sequence and prediction only
[TXT]jp_OC4BRmQ.svg.html2015-04-17 20:54 128KJalview SVG summary of results
[ ]jp_OC4BRmQ.tar.gz2015-04-17 20:54 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.