JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fsqa1.name2015-04-17 17:29 0 Job name flag file
[ ]jp_3ti3Q7y.align2015-04-17 18:45 45KPSIBLAST alignment in FASTA format
[TXT]jp_3ti3Q7y.als2015-04-17 18:45 3.8KAlscript command file for PS/PDF output
[ ]jp_3ti3Q7y.blast.gz2015-04-17 18:45 132KCompressed PSIBLAST output file
[TXT]jp_3ti3Q7y.coils.csv2015-04-17 18:45 1.4KCOILS output in CSV format
[ ]jp_3ti3Q7y.coilseq.lupas_142015-04-17 18:45 9.7KCOILS output, window length 14
[ ]jp_3ti3Q7y.coilseq.lupas_212015-04-17 18:45 9.7KCOILS output, window length 21
[ ]jp_3ti3Q7y.coilseq.lupas_282015-04-17 18:45 9.7KCOILS output, window length 28
[ ]jp_3ti3Q7y.concise2015-04-17 18:45 96KPrediction: coiled-coil, solvent, alignment
[ ]jp_3ti3Q7y.concise.blc2015-04-17 18:45 48KBLC format prediction and alignment data
[ ]jp_3ti3Q7y.concise.fasta2015-04-17 18:45 47KPrediction: coiled-coil, solvent, alignment
[ ]jp_3ti3Q7y.concise.pdf2015-04-17 18:45 337KPDF prediction and alignment data
[ ]jp_3ti3Q7y.concise.ps2015-04-17 18:45 5.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_3ti3Q7y.fasta2015-04-17 18:43 248 Input query sequence in FASTA format
[ ]jp_3ti3Q7y.full_MSA.fasta2015-04-17 18:45 162KFull MSA before JPred filters in FASTA
[TXT]jp_3ti3Q7y.full_MSA.fasta.noGaps.html2015-04-17 18:45 82KFull MSA before JPred filters in FASTA
[TXT]jp_3ti3Q7y.full_MSA.fasta.withGaps.html2015-04-17 18:45 856KFull MSA before JPred filters in FASTA
[ ]jp_3ti3Q7y.hmm2015-04-17 18:45 44KHHMer2 profile of the alignment
[TXT]jp_3ti3Q7y.html2015-04-17 18:45 101KHTML prediction and alignment data
[ ]jp_3ti3Q7y.input2015-04-17 17:29 239 Raw input data for analysis
[ ]jp_3ti3Q7y.jalview2015-04-17 18:45 5.5KJalview annotation file for alignment
[ ]jp_3ti3Q7y.jnet2015-04-17 18:45 8.5KJnet secondary structure output
[TXT]jp_3ti3Q7y.profile2015-04-17 18:44 37KPSIBLAST profile from alignment
[ ]jp_3ti3Q7y.pssm2015-04-17 18:45 50KPSIBLAST PSSM for Jnet
[TXT]jp_3ti3Q7y.results.html2016-02-15 12:19 102KJPred results page
[TXT]jp_3ti3Q7y.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_3ti3Q7y.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_3ti3Q7y.seq2015-04-17 17:29 248 Sequence data file
[TXT]jp_3ti3Q7y.simple.html2015-04-17 18:45 1.8KBrief HTML: sequence and prediction only
[TXT]jp_3ti3Q7y.svg.html2015-04-17 18:45 93KJalview SVG summary of results
[ ]jp_3ti3Q7y.tar.gz2015-04-17 18:46 692KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.