JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:05 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2fvva1.name2015-04-17 19:20 0 Job name flag file
[ ]jp_etj1MKr.align2015-04-17 22:04 139KPSIBLAST alignment in FASTA format
[TXT]jp_etj1MKr.als2015-04-17 22:05 2.8KAlscript command file for PS/PDF output
[ ]jp_etj1MKr.blast.gz2015-04-17 22:03 7.7MCompressed PSIBLAST output file
[TXT]jp_etj1MKr.coils.csv2015-04-17 22:04 840 COILS output in CSV format
[ ]jp_etj1MKr.coilseq.lupas_142015-04-17 22:04 5.7KCOILS output, window length 14
[ ]jp_etj1MKr.coilseq.lupas_212015-04-17 22:04 5.7KCOILS output, window length 21
[ ]jp_etj1MKr.coilseq.lupas_282015-04-17 22:04 5.7KCOILS output, window length 28
[ ]jp_etj1MKr.concise2015-04-17 22:05 270KPrediction: coiled-coil, solvent, alignment
[ ]jp_etj1MKr.concise.blc2015-04-17 22:05 139KBLC format prediction and alignment data
[ ]jp_etj1MKr.concise.fasta2015-04-17 22:05 140KPrediction: coiled-coil, solvent, alignment
[ ]jp_etj1MKr.concise.pdf2015-04-17 22:05 951KPDF prediction and alignment data
[ ]jp_etj1MKr.concise.ps2015-04-17 22:05 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_etj1MKr.fasta2015-04-17 21:50 149 Input query sequence in FASTA format
[ ]jp_etj1MKr.full_MSA.fasta2015-04-17 22:04 16MFull MSA before JPred filters in FASTA
[TXT]jp_etj1MKr.full_MSA.fasta.noGaps.html2015-04-17 22:05 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_etj1MKr.full_MSA.fasta.withGaps.html2015-04-17 22:05 47MFull MSA before JPred filters in FASTA
[ ]jp_etj1MKr.hmm2015-04-17 22:04 25KHHMer2 profile of the alignment
[TXT]jp_etj1MKr.html2015-04-17 22:05 326KHTML prediction and alignment data
[ ]jp_etj1MKr.input2015-04-17 19:20 142 Raw input data for analysis
[ ]jp_etj1MKr.jalview2015-04-17 22:05 3.5KJalview annotation file for alignment
[ ]jp_etj1MKr.jnet2015-04-17 22:04 5.0KJnet secondary structure output
[TXT]jp_etj1MKr.profile2015-04-17 22:02 22KPSIBLAST profile from alignment
[ ]jp_etj1MKr.pssm2015-04-17 22:04 29KPSIBLAST PSSM for Jnet
[TXT]jp_etj1MKr.results.html2016-02-15 12:19 64KJPred results page
[TXT]jp_etj1MKr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_etj1MKr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_etj1MKr.seq2015-04-17 19:20 149 Sequence data file
[TXT]jp_etj1MKr.simple.html2015-04-17 22:05 1.4KBrief HTML: sequence and prediction only
[TXT]jp_etj1MKr.svg.html2015-04-17 22:05 56KJalview SVG summary of results
[ ]jp_etj1MKr.tar.gz2015-04-17 22:05 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.