JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:30 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2guka1.name2015-04-17 17:53 0 Job name flag file
[ ]jp_RpCpkXu.align2015-04-17 19:30 12KPSIBLAST alignment in FASTA format
[TXT]jp_RpCpkXu.als2015-04-17 19:30 2.3KAlscript command file for PS/PDF output
[ ]jp_RpCpkXu.blast.gz2015-04-17 19:30 31KCompressed PSIBLAST output file
[TXT]jp_RpCpkXu.coils.csv2015-04-17 19:30 696 COILS output in CSV format
[ ]jp_RpCpkXu.coilseq.lupas_142015-04-17 19:30 4.7KCOILS output, window length 14
[ ]jp_RpCpkXu.coilseq.lupas_212015-04-17 19:30 4.7KCOILS output, window length 21
[ ]jp_RpCpkXu.coilseq.lupas_282015-04-17 19:30 4.7KCOILS output, window length 28
[ ]jp_RpCpkXu.concise2015-04-17 19:30 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_RpCpkXu.concise.blc2015-04-17 19:30 14KBLC format prediction and alignment data
[ ]jp_RpCpkXu.concise.fasta2015-04-17 19:30 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_RpCpkXu.concise.pdf2015-04-17 19:30 91KPDF prediction and alignment data
[ ]jp_RpCpkXu.concise.ps2015-04-17 19:30 1.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_RpCpkXu.fasta2015-04-17 19:25 125 Input query sequence in FASTA format
[ ]jp_RpCpkXu.full_MSA.fasta2015-04-17 19:30 19KFull MSA before JPred filters in FASTA
[TXT]jp_RpCpkXu.full_MSA.fasta.noGaps.html2015-04-17 19:30 35KFull MSA before JPred filters in FASTA
[TXT]jp_RpCpkXu.full_MSA.fasta.withGaps.html2015-04-17 19:30 38KFull MSA before JPred filters in FASTA
[ ]jp_RpCpkXu.hmm2015-04-17 19:30 21KHHMer2 profile of the alignment
[TXT]jp_RpCpkXu.html2015-04-17 19:30 43KHTML prediction and alignment data
[ ]jp_RpCpkXu.input2015-04-17 17:53 118 Raw input data for analysis
[ ]jp_RpCpkXu.jalview2015-04-17 19:30 3.1KJalview annotation file for alignment
[ ]jp_RpCpkXu.jnet2015-04-17 19:30 4.1KJnet secondary structure output
[TXT]jp_RpCpkXu.profile2015-04-17 19:29 18KPSIBLAST profile from alignment
[ ]jp_RpCpkXu.pssm2015-04-17 19:30 24KPSIBLAST PSSM for Jnet
[TXT]jp_RpCpkXu.results.html2016-02-15 12:20 55KJPred results page
[TXT]jp_RpCpkXu.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RpCpkXu.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RpCpkXu.seq2015-04-17 17:53 125 Sequence data file
[TXT]jp_RpCpkXu.simple.html2015-04-17 19:30 1.3KBrief HTML: sequence and prediction only
[TXT]jp_RpCpkXu.svg.html2015-04-17 19:30 47KJalview SVG summary of results
[ ]jp_RpCpkXu.tar.gz2015-04-17 19:30 182KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.