JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:16 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2h6fa1.name2015-04-17 18:07 0 Job name flag file
[ ]jp_gvd6sWN.align2015-04-17 20:09 258KPSIBLAST alignment in FASTA format
[TXT]jp_gvd6sWN.als2015-04-17 20:09 3.8KAlscript command file for PS/PDF output
[ ]jp_gvd6sWN.blast.gz2015-04-17 19:57 46MCompressed PSIBLAST output file
[TXT]jp_gvd6sWN.coils.csv2015-04-17 20:09 1.9KCOILS output in CSV format
[ ]jp_gvd6sWN.coilseq.lupas_142015-04-17 20:09 13KCOILS output, window length 14
[ ]jp_gvd6sWN.coilseq.lupas_212015-04-17 20:09 13KCOILS output, window length 21
[ ]jp_gvd6sWN.coilseq.lupas_282015-04-17 20:09 13KCOILS output, window length 28
[ ]jp_gvd6sWN.concise2015-04-17 20:09 514KPrediction: coiled-coil, solvent, alignment
[ ]jp_gvd6sWN.concise.blc2015-04-17 20:09 259KBLC format prediction and alignment data
[ ]jp_gvd6sWN.concise.fasta2015-04-17 20:09 261KPrediction: coiled-coil, solvent, alignment
[ ]jp_gvd6sWN.concise.pdf2015-04-17 20:10 1.6MPDF prediction and alignment data
[ ]jp_gvd6sWN.concise.ps2015-04-17 20:09 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_gvd6sWN.fasta2015-04-17 19:46 332 Input query sequence in FASTA format
[ ]jp_gvd6sWN.full_MSA.fasta2015-04-17 20:05 255MFull MSA before JPred filters in FASTA
[TXT]jp_gvd6sWN.full_MSA.fasta.noGaps.html2015-04-17 20:16 13MFull MSA before JPred filters in FASTA
[TXT]jp_gvd6sWN.full_MSA.fasta.withGaps.html2015-04-17 20:16 484MFull MSA before JPred filters in FASTA
[ ]jp_gvd6sWN.hmm2015-04-17 20:09 59KHHMer2 profile of the alignment
[TXT]jp_gvd6sWN.html2015-04-17 20:09 441KHTML prediction and alignment data
[ ]jp_gvd6sWN.input2015-04-17 18:07 322 Raw input data for analysis
[ ]jp_gvd6sWN.jalview2015-04-17 20:09 7.3KJalview annotation file for alignment
[ ]jp_gvd6sWN.jnet2015-04-17 20:09 11KJnet secondary structure output
[TXT]jp_gvd6sWN.profile2015-04-17 19:52 50KPSIBLAST profile from alignment
[ ]jp_gvd6sWN.pssm2015-04-17 20:09 68KPSIBLAST PSSM for Jnet
[TXT]jp_gvd6sWN.results.html2016-02-15 12:20 135KJPred results page
[TXT]jp_gvd6sWN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_gvd6sWN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_gvd6sWN.seq2015-04-17 18:07 332 Sequence data file
[TXT]jp_gvd6sWN.simple.html2015-04-17 20:09 1.9KBrief HTML: sequence and prediction only
[TXT]jp_gvd6sWN.svg.html2015-04-17 20:16 127KJalview SVG summary of results
[ ]jp_gvd6sWN.tar.gz2015-04-17 20:16 85MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.