JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:52 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2h6fb1.name2015-04-17 17:31 0 Job name flag file
[ ]jp_wOCfhBz.align2015-04-17 18:50 488KPSIBLAST alignment in FASTA format
[TXT]jp_wOCfhBz.als2015-04-17 18:50 4.0KAlscript command file for PS/PDF output
[ ]jp_wOCfhBz.blast.gz2015-04-17 18:48 6.4MCompressed PSIBLAST output file
[TXT]jp_wOCfhBz.coils.csv2015-04-17 18:50 2.4KCOILS output in CSV format
[ ]jp_wOCfhBz.coilseq.lupas_142015-04-17 18:50 17KCOILS output, window length 14
[ ]jp_wOCfhBz.coilseq.lupas_212015-04-17 18:50 17KCOILS output, window length 21
[ ]jp_wOCfhBz.coilseq.lupas_282015-04-17 18:50 17KCOILS output, window length 28
[ ]jp_wOCfhBz.concise2015-04-17 18:50 970KPrediction: coiled-coil, solvent, alignment
[ ]jp_wOCfhBz.concise.blc2015-04-17 18:50 487KBLC format prediction and alignment data
[ ]jp_wOCfhBz.concise.fasta2015-04-17 18:50 493KPrediction: coiled-coil, solvent, alignment
[ ]jp_wOCfhBz.concise.pdf2015-04-17 18:51 3.1MPDF prediction and alignment data
[ ]jp_wOCfhBz.concise.ps2015-04-17 18:50 59MPrediction: coiled-coil, solvent, alignment
[ ]jp_wOCfhBz.fasta2015-04-17 18:44 419 Input query sequence in FASTA format
[ ]jp_wOCfhBz.full_MSA.fasta2015-04-17 18:49 14MFull MSA before JPred filters in FASTA
[TXT]jp_wOCfhBz.full_MSA.fasta.noGaps.html2015-04-17 18:52 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_wOCfhBz.full_MSA.fasta.withGaps.html2015-04-17 18:52 32MFull MSA before JPred filters in FASTA
[ ]jp_wOCfhBz.hmm2015-04-17 18:50 75KHHMer2 profile of the alignment
[TXT]jp_wOCfhBz.html2015-04-17 18:50 750KHTML prediction and alignment data
[ ]jp_wOCfhBz.input2015-04-17 17:31 408 Raw input data for analysis
[ ]jp_wOCfhBz.jalview2015-04-17 18:50 8.8KJalview annotation file for alignment
[ ]jp_wOCfhBz.jnet2015-04-17 18:50 15KJnet secondary structure output
[TXT]jp_wOCfhBz.profile2015-04-17 18:47 64KPSIBLAST profile from alignment
[ ]jp_wOCfhBz.pssm2015-04-17 18:50 86KPSIBLAST PSSM for Jnet
[TXT]jp_wOCfhBz.results.html2016-02-15 12:20 164KJPred results page
[TXT]jp_wOCfhBz.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_wOCfhBz.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_wOCfhBz.seq2015-04-17 17:31 419 Sequence data file
[TXT]jp_wOCfhBz.simple.html2015-04-17 18:50 2.1KBrief HTML: sequence and prediction only
[TXT]jp_wOCfhBz.svg.html2015-04-17 18:52 156KJalview SVG summary of results
[ ]jp_wOCfhBz.tar.gz2015-04-17 18:52 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.