JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:25 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2hqsa1.name2015-04-17 17:56 0 Job name flag file
[ ]jp_J0dLZGr.align2015-04-17 21:16 219KPSIBLAST alignment in FASTA format
[TXT]jp_J0dLZGr.als2015-04-17 21:16 4.8KAlscript command file for PS/PDF output
[ ]jp_J0dLZGr.blast.gz2015-04-17 20:58 93MCompressed PSIBLAST output file
[TXT]jp_J0dLZGr.coils.csv2015-04-17 21:16 1.6KCOILS output in CSV format
[ ]jp_J0dLZGr.coilseq.lupas_142015-04-17 21:16 11KCOILS output, window length 14
[ ]jp_J0dLZGr.coilseq.lupas_212015-04-17 21:16 11KCOILS output, window length 21
[ ]jp_J0dLZGr.coilseq.lupas_282015-04-17 21:16 11KCOILS output, window length 28
[ ]jp_J0dLZGr.concise2015-04-17 21:16 437KPrediction: coiled-coil, solvent, alignment
[ ]jp_J0dLZGr.concise.blc2015-04-17 21:16 220KBLC format prediction and alignment data
[ ]jp_J0dLZGr.concise.fasta2015-04-17 21:16 222KPrediction: coiled-coil, solvent, alignment
[ ]jp_J0dLZGr.concise.pdf2015-04-17 21:16 1.5MPDF prediction and alignment data
[ ]jp_J0dLZGr.concise.ps2015-04-17 21:16 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_J0dLZGr.fasta2015-04-17 19:28 289 Input query sequence in FASTA format
[ ]jp_J0dLZGr.full_MSA.fasta2015-04-17 21:10 252MFull MSA before JPred filters in FASTA
[TXT]jp_J0dLZGr.full_MSA.fasta.noGaps.html2015-04-17 21:25 13MFull MSA before JPred filters in FASTA
[TXT]jp_J0dLZGr.full_MSA.fasta.withGaps.html2015-04-17 21:25 462MFull MSA before JPred filters in FASTA
[ ]jp_J0dLZGr.hmm2015-04-17 21:16 51KHHMer2 profile of the alignment
[TXT]jp_J0dLZGr.html2015-04-17 21:16 387KHTML prediction and alignment data
[ ]jp_J0dLZGr.input2015-04-17 17:56 280 Raw input data for analysis
[ ]jp_J0dLZGr.jalview2015-04-17 21:16 6.3KJalview annotation file for alignment
[ ]jp_J0dLZGr.jnet2015-04-17 21:16 10KJnet secondary structure output
[TXT]jp_J0dLZGr.profile2015-04-17 20:29 44KPSIBLAST profile from alignment
[ ]jp_J0dLZGr.pssm2015-04-17 21:16 59KPSIBLAST PSSM for Jnet
[TXT]jp_J0dLZGr.results.html2016-02-15 12:20 118KJPred results page
[TXT]jp_J0dLZGr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_J0dLZGr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_J0dLZGr.seq2015-04-17 17:56 289 Sequence data file
[TXT]jp_J0dLZGr.simple.html2015-04-17 21:16 2.0KBrief HTML: sequence and prediction only
[TXT]jp_J0dLZGr.svg.html2015-04-17 21:25 110KJalview SVG summary of results
[ ]jp_J0dLZGr.tar.gz2015-04-17 21:25 131MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.