A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 19:52 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2i53a1.name | 2015-04-17 18:08 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_JVwR17p.align | 2015-04-17 19:52 | 119K | PSIBLAST alignment in FASTA format |
| jp_JVwR17p.als | 2015-04-17 19:52 | 2.3K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_JVwR17p.blast.gz | 2015-04-17 19:51 | 3.6M | Compressed PSIBLAST output file |
| jp_JVwR17p.coils.csv | 2015-04-17 19:52 | 894 | COILS output in CSV format |
| jp_JVwR17p.coilseq.lupas_14 | 2015-04-17 19:52 | 6.0K | COILS output, window length 14 |
| jp_JVwR17p.coilseq.lupas_21 | 2015-04-17 19:52 | 6.0K | COILS output, window length 21 |
| jp_JVwR17p.coilseq.lupas_28 | 2015-04-17 19:52 | 6.0K | COILS output, window length 28 |
| jp_JVwR17p.concise | 2015-04-17 19:52 | 236K | Prediction: coiled-coil, solvent, alignment |
| jp_JVwR17p.concise.blc | 2015-04-17 19:52 | 120K | BLC format prediction and alignment data |
| jp_JVwR17p.concise.fasta | 2015-04-17 19:52 | 122K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_JVwR17p.concise.pdf | 2015-04-17 19:52 | 800K | PDF prediction and alignment data |
| jp_JVwR17p.concise.ps | 2015-04-17 19:52 | 14M | Prediction: coiled-coil, solvent, alignment |
| jp_JVwR17p.fasta | 2015-04-17 19:47 | 159 | Input query sequence in FASTA format |
| jp_JVwR17p.full_MSA.fasta | 2015-04-17 19:51 | 10M | Full MSA before JPred filters in FASTA |
| jp_JVwR17p.full_MSA.fasta.noGaps.html | 2015-04-17 19:52 | 1.3M | Full MSA before JPred filters in FASTA |
| jp_JVwR17p.full_MSA.fasta.withGaps.html | 2015-04-17 19:52 | 24M | Full MSA before JPred filters in FASTA |
| jp_JVwR17p.hmm | 2015-04-17 19:52 | 27K | HHMer2 profile of the alignment |
| jp_JVwR17p.html | 2015-04-17 19:52 | 279K | HTML prediction and alignment data |
| jp_JVwR17p.input | 2015-04-17 18:08 | 151 | Raw input data for analysis |
| jp_JVwR17p.jalview | 2015-04-17 19:52 | 3.7K | Jalview annotation file for alignment |
| jp_JVwR17p.jnet | 2015-04-17 19:52 | 5.3K | Jnet secondary structure output |
| jp_JVwR17p.profile | 2015-04-17 19:49 | 23K | PSIBLAST profile from alignment |
| jp_JVwR17p.pssm | 2015-04-17 19:52 | 31K | PSIBLAST PSSM for Jnet |
| jp_JVwR17p.results.html | 2016-02-15 12:20 | 67K | JPred results page |
| jp_JVwR17p.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_JVwR17p.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_JVwR17p.seq | 2015-04-17 18:08 | 159 | Sequence data file |
| jp_JVwR17p.simple.html | 2015-04-17 19:52 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_JVwR17p.svg.html) | jp_JVwR17p.svg.html | 2015-04-17 19:52 | 59K | Jalview SVG summary of results |
| jp_JVwR17p.tar.gz | 2015-04-17 19:52 | 6.7M | Archive containing complete results |
