JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ia1a1.name2015-04-17 16:54 0 Job name flag file
[ ]jp_GsGXbbF.align2015-04-17 17:56 39KPSIBLAST alignment in FASTA format
[TXT]jp_GsGXbbF.als2015-04-17 17:56 2.6KAlscript command file for PS/PDF output
[ ]jp_GsGXbbF.blast.gz2015-04-17 17:56 123KCompressed PSIBLAST output file
[TXT]jp_GsGXbbF.coils.csv2015-04-17 17:56 1.0KCOILS output in CSV format
[ ]jp_GsGXbbF.coilseq.lupas_142015-04-17 17:56 6.9KCOILS output, window length 14
[ ]jp_GsGXbbF.coilseq.lupas_212015-04-17 17:56 6.9KCOILS output, window length 21
[ ]jp_GsGXbbF.coilseq.lupas_282015-04-17 17:56 6.9KCOILS output, window length 28
[ ]jp_GsGXbbF.concise2015-04-17 17:56 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_GsGXbbF.concise.blc2015-04-17 17:56 41KBLC format prediction and alignment data
[ ]jp_GsGXbbF.concise.fasta2015-04-17 17:56 41KPrediction: coiled-coil, solvent, alignment
[ ]jp_GsGXbbF.concise.pdf2015-04-17 17:57 255KPDF prediction and alignment data
[ ]jp_GsGXbbF.concise.ps2015-04-17 17:57 4.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_GsGXbbF.fasta2015-04-17 17:51 180 Input query sequence in FASTA format
[ ]jp_GsGXbbF.full_MSA.fasta2015-04-17 17:56 172KFull MSA before JPred filters in FASTA
[TXT]jp_GsGXbbF.full_MSA.fasta.noGaps.html2015-04-17 17:57 122KFull MSA before JPred filters in FASTA
[TXT]jp_GsGXbbF.full_MSA.fasta.withGaps.html2015-04-17 17:57 725KFull MSA before JPred filters in FASTA
[ ]jp_GsGXbbF.hmm2015-04-17 17:56 31KHHMer2 profile of the alignment
[TXT]jp_GsGXbbF.html2015-04-17 17:56 98KHTML prediction and alignment data
[ ]jp_GsGXbbF.input2015-04-17 16:54 172 Raw input data for analysis
[ ]jp_GsGXbbF.jalview2015-04-17 17:56 4.2KJalview annotation file for alignment
[ ]jp_GsGXbbF.jnet2015-04-17 17:56 6.1KJnet secondary structure output
[TXT]jp_GsGXbbF.profile2015-04-17 17:54 27KPSIBLAST profile from alignment
[ ]jp_GsGXbbF.pssm2015-04-17 17:56 35KPSIBLAST PSSM for Jnet
[TXT]jp_GsGXbbF.results.html2016-02-15 12:20 74KJPred results page
[TXT]jp_GsGXbbF.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_GsGXbbF.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_GsGXbbF.seq2015-04-17 16:54 180 Sequence data file
[TXT]jp_GsGXbbF.simple.html2015-04-17 17:56 1.4KBrief HTML: sequence and prediction only
[TXT]jp_GsGXbbF.svg.html2015-04-17 17:57 66KJalview SVG summary of results
[ ]jp_GsGXbbF.tar.gz2015-04-17 17:57 533KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.