JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:59 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2icha1.name2015-04-17 15:40 0 Job name flag file
[ ]jp_5gbQXje.align2015-04-17 15:58 252KPSIBLAST alignment in FASTA format
[TXT]jp_5gbQXje.als2015-04-17 15:58 4.9KAlscript command file for PS/PDF output
[ ]jp_5gbQXje.blast.gz2015-04-17 15:57 1.5MCompressed PSIBLAST output file
[TXT]jp_5gbQXje.coils.csv2015-04-17 15:58 1.9KCOILS output in CSV format
[ ]jp_5gbQXje.coilseq.lupas_142015-04-17 15:58 13KCOILS output, window length 14
[ ]jp_5gbQXje.coilseq.lupas_212015-04-17 15:58 13KCOILS output, window length 21
[ ]jp_5gbQXje.coilseq.lupas_282015-04-17 15:58 13KCOILS output, window length 28
[ ]jp_5gbQXje.concise2015-04-17 15:58 504KPrediction: coiled-coil, solvent, alignment
[ ]jp_5gbQXje.concise.blc2015-04-17 15:58 253KBLC format prediction and alignment data
[ ]jp_5gbQXje.concise.fasta2015-04-17 15:58 256KPrediction: coiled-coil, solvent, alignment
[ ]jp_5gbQXje.concise.pdf2015-04-17 15:58 1.7MPDF prediction and alignment data
[ ]jp_5gbQXje.concise.ps2015-04-17 15:58 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_5gbQXje.fasta2015-04-17 15:52 337 Input query sequence in FASTA format
[ ]jp_5gbQXje.full_MSA.fasta2015-04-17 15:57 3.1MFull MSA before JPred filters in FASTA
[TXT]jp_5gbQXje.full_MSA.fasta.noGaps.html2015-04-17 15:58 474KFull MSA before JPred filters in FASTA
[TXT]jp_5gbQXje.full_MSA.fasta.withGaps.html2015-04-17 15:58 11MFull MSA before JPred filters in FASTA
[ ]jp_5gbQXje.hmm2015-04-17 15:58 60KHHMer2 profile of the alignment
[TXT]jp_5gbQXje.html2015-04-17 15:58 424KHTML prediction and alignment data
[ ]jp_5gbQXje.input2015-04-17 15:40 327 Raw input data for analysis
[ ]jp_5gbQXje.jalview2015-04-17 15:58 7.2KJalview annotation file for alignment
[ ]jp_5gbQXje.jnet2015-04-17 15:58 12KJnet secondary structure output
[TXT]jp_5gbQXje.profile2015-04-17 15:55 51KPSIBLAST profile from alignment
[ ]jp_5gbQXje.pssm2015-04-17 15:58 69KPSIBLAST PSSM for Jnet
[TXT]jp_5gbQXje.results.html2016-02-15 12:20 133KJPred results page
[TXT]jp_5gbQXje.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5gbQXje.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5gbQXje.seq2015-04-17 15:40 337 Sequence data file
[TXT]jp_5gbQXje.simple.html2015-04-17 15:58 2.1KBrief HTML: sequence and prediction only
[TXT]jp_5gbQXje.svg.html2015-04-17 15:59 125KJalview SVG summary of results
[ ]jp_5gbQXje.tar.gz2015-04-17 15:59 4.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.