JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:45 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2isba_.name2015-04-17 18:02 0 Job name flag file
[ ]jp_EPz3kus.align2015-04-17 19:45 143KPSIBLAST alignment in FASTA format
[TXT]jp_EPz3kus.als2015-04-17 19:45 3.3KAlscript command file for PS/PDF output
[ ]jp_EPz3kus.blast.gz2015-04-17 19:44 842KCompressed PSIBLAST output file
[TXT]jp_EPz3kus.coils.csv2015-04-17 19:45 1.1KCOILS output in CSV format
[ ]jp_EPz3kus.coilseq.lupas_142015-04-17 19:45 7.7KCOILS output, window length 14
[ ]jp_EPz3kus.coilseq.lupas_212015-04-17 19:45 7.7KCOILS output, window length 21
[ ]jp_EPz3kus.coilseq.lupas_282015-04-17 19:45 7.7KCOILS output, window length 28
[ ]jp_EPz3kus.concise2015-04-17 19:45 283KPrediction: coiled-coil, solvent, alignment
[ ]jp_EPz3kus.concise.blc2015-04-17 19:45 144KBLC format prediction and alignment data
[ ]jp_EPz3kus.concise.fasta2015-04-17 19:45 145KPrediction: coiled-coil, solvent, alignment
[ ]jp_EPz3kus.concise.pdf2015-04-17 19:45 1.0MPDF prediction and alignment data
[ ]jp_EPz3kus.concise.ps2015-04-17 19:45 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_EPz3kus.fasta2015-04-17 19:38 199 Input query sequence in FASTA format
[ ]jp_EPz3kus.full_MSA.fasta2015-04-17 19:44 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_EPz3kus.full_MSA.fasta.noGaps.html2015-04-17 19:45 556KFull MSA before JPred filters in FASTA
[TXT]jp_EPz3kus.full_MSA.fasta.withGaps.html2015-04-17 19:45 4.9MFull MSA before JPred filters in FASTA
[ ]jp_EPz3kus.hmm2015-04-17 19:45 35KHHMer2 profile of the alignment
[TXT]jp_EPz3kus.html2015-04-17 19:45 299KHTML prediction and alignment data
[ ]jp_EPz3kus.input2015-04-17 18:02 191 Raw input data for analysis
[ ]jp_EPz3kus.jalview2015-04-17 19:45 4.5KJalview annotation file for alignment
[ ]jp_EPz3kus.jnet2015-04-17 19:45 6.8KJnet secondary structure output
[TXT]jp_EPz3kus.profile2015-04-17 19:40 30KPSIBLAST profile from alignment
[ ]jp_EPz3kus.pssm2015-04-17 19:45 40KPSIBLAST PSSM for Jnet
[TXT]jp_EPz3kus.results.html2016-02-15 12:20 83KJPred results page
[TXT]jp_EPz3kus.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EPz3kus.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EPz3kus.seq2015-04-17 18:02 199 Sequence data file
[TXT]jp_EPz3kus.simple.html2015-04-17 19:45 1.6KBrief HTML: sequence and prediction only
[TXT]jp_EPz3kus.svg.html2015-04-17 19:45 75KJalview SVG summary of results
[ ]jp_EPz3kus.tar.gz2015-04-17 19:45 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.