JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:26 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2mhra_.name2015-04-17 16:55 0 Job name flag file
[ ]jp_nWDX4DL.align2015-04-17 18:25 207KPSIBLAST alignment in FASTA format
[TXT]jp_nWDX4DL.als2015-04-17 18:25 1.5KAlscript command file for PS/PDF output
[ ]jp_nWDX4DL.blast.gz2015-04-17 18:22 971KCompressed PSIBLAST output file
[TXT]jp_nWDX4DL.coils.csv2015-04-17 18:25 738 COILS output in CSV format
[ ]jp_nWDX4DL.coilseq.lupas_142015-04-17 18:25 5.0KCOILS output, window length 14
[ ]jp_nWDX4DL.coilseq.lupas_212015-04-17 18:25 5.0KCOILS output, window length 21
[ ]jp_nWDX4DL.coilseq.lupas_282015-04-17 18:25 5.0KCOILS output, window length 28
[ ]jp_nWDX4DL.concise2015-04-17 18:25 400KPrediction: coiled-coil, solvent, alignment
[ ]jp_nWDX4DL.concise.blc2015-04-17 18:25 206KBLC format prediction and alignment data
[ ]jp_nWDX4DL.concise.fasta2015-04-17 18:25 208KPrediction: coiled-coil, solvent, alignment
[ ]jp_nWDX4DL.concise.pdf2015-04-17 18:26 1.4MPDF prediction and alignment data
[ ]jp_nWDX4DL.concise.ps2015-04-17 18:25 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_nWDX4DL.fasta2015-04-17 17:52 132 Input query sequence in FASTA format
[ ]jp_nWDX4DL.full_MSA.fasta2015-04-17 18:22 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_nWDX4DL.full_MSA.fasta.noGaps.html2015-04-17 18:26 449KFull MSA before JPred filters in FASTA
[TXT]jp_nWDX4DL.full_MSA.fasta.withGaps.html2015-04-17 18:26 5.3MFull MSA before JPred filters in FASTA
[ ]jp_nWDX4DL.hmm2015-04-17 18:25 22KHHMer2 profile of the alignment
[TXT]jp_nWDX4DL.html2015-04-17 18:25 517KHTML prediction and alignment data
[ ]jp_nWDX4DL.input2015-04-17 16:55 125 Raw input data for analysis
[ ]jp_nWDX4DL.jalview2015-04-17 18:25 3.3KJalview annotation file for alignment
[ ]jp_nWDX4DL.jnet2015-04-17 18:25 4.4KJnet secondary structure output
[TXT]jp_nWDX4DL.profile2015-04-17 18:13 19KPSIBLAST profile from alignment
[ ]jp_nWDX4DL.pssm2015-04-17 18:25 25KPSIBLAST PSSM for Jnet
[TXT]jp_nWDX4DL.results.html2016-02-15 12:20 54KJPred results page
[TXT]jp_nWDX4DL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_nWDX4DL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_nWDX4DL.seq2015-04-17 16:55 132 Sequence data file
[TXT]jp_nWDX4DL.simple.html2015-04-17 18:25 1.1KBrief HTML: sequence and prediction only
[TXT]jp_nWDX4DL.svg.html2015-04-17 18:26 45KJalview SVG summary of results
[ ]jp_nWDX4DL.tar.gz2015-04-17 18:26 3.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.