JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ob3a_.name2015-04-17 16:21 0 Job name flag file
[ ]jp_WlzRwqx.align2015-04-17 16:56 396KPSIBLAST alignment in FASTA format
[TXT]jp_WlzRwqx.als2015-04-17 16:56 4.4KAlscript command file for PS/PDF output
[ ]jp_WlzRwqx.blast.gz2015-04-17 16:55 3.3MCompressed PSIBLAST output file
[TXT]jp_WlzRwqx.coils.csv2015-04-17 16:56 2.0KCOILS output in CSV format
[ ]jp_WlzRwqx.coilseq.lupas_142015-04-17 16:56 14KCOILS output, window length 14
[ ]jp_WlzRwqx.coilseq.lupas_212015-04-17 16:56 14KCOILS output, window length 21
[ ]jp_WlzRwqx.coilseq.lupas_282015-04-17 16:56 14KCOILS output, window length 28
[ ]jp_WlzRwqx.concise2015-04-17 16:56 784KPrediction: coiled-coil, solvent, alignment
[ ]jp_WlzRwqx.concise.blc2015-04-17 16:56 395KBLC format prediction and alignment data
[ ]jp_WlzRwqx.concise.fasta2015-04-17 16:56 399KPrediction: coiled-coil, solvent, alignment
[ ]jp_WlzRwqx.concise.pdf2015-04-17 16:57 2.6MPDF prediction and alignment data
[ ]jp_WlzRwqx.concise.ps2015-04-17 16:56 48MPrediction: coiled-coil, solvent, alignment
[ ]jp_WlzRwqx.fasta2015-04-17 16:49 346 Input query sequence in FASTA format
[ ]jp_WlzRwqx.full_MSA.fasta2015-04-17 16:55 12MFull MSA before JPred filters in FASTA
[TXT]jp_WlzRwqx.full_MSA.fasta.noGaps.html2015-04-17 16:57 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_WlzRwqx.full_MSA.fasta.withGaps.html2015-04-17 16:57 39MFull MSA before JPred filters in FASTA
[ ]jp_WlzRwqx.hmm2015-04-17 16:56 62KHHMer2 profile of the alignment
[TXT]jp_WlzRwqx.html2015-04-17 16:56 645KHTML prediction and alignment data
[ ]jp_WlzRwqx.input2015-04-17 16:21 336 Raw input data for analysis
[ ]jp_WlzRwqx.jalview2015-04-17 16:56 7.4KJalview annotation file for alignment
[ ]jp_WlzRwqx.jnet2015-04-17 16:56 12KJnet secondary structure output
[TXT]jp_WlzRwqx.profile2015-04-17 16:53 53KPSIBLAST profile from alignment
[ ]jp_WlzRwqx.pssm2015-04-17 16:56 71KPSIBLAST PSSM for Jnet
[TXT]jp_WlzRwqx.results.html2016-02-15 12:20 138KJPred results page
[TXT]jp_WlzRwqx.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_WlzRwqx.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_WlzRwqx.seq2015-04-17 16:21 346 Sequence data file
[TXT]jp_WlzRwqx.simple.html2015-04-17 16:56 2.0KBrief HTML: sequence and prediction only
[TXT]jp_WlzRwqx.svg.html2015-04-17 16:57 130KJalview SVG summary of results
[ ]jp_WlzRwqx.tar.gz2015-04-17 16:57 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.