JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:01 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2p0ta1.name2015-04-17 15:43 0 Job name flag file
[ ]jp_B7WYpqZ.align2015-04-17 16:01 77KPSIBLAST alignment in FASTA format
[TXT]jp_B7WYpqZ.als2015-04-17 16:01 2.5KAlscript command file for PS/PDF output
[ ]jp_B7WYpqZ.blast.gz2015-04-17 16:01 433KCompressed PSIBLAST output file
[TXT]jp_B7WYpqZ.coils.csv2015-04-17 16:01 918 COILS output in CSV format
[ ]jp_B7WYpqZ.coilseq.lupas_142015-04-17 16:01 6.2KCOILS output, window length 14
[ ]jp_B7WYpqZ.coilseq.lupas_212015-04-17 16:01 6.2KCOILS output, window length 21
[ ]jp_B7WYpqZ.coilseq.lupas_282015-04-17 16:01 6.2KCOILS output, window length 28
[ ]jp_B7WYpqZ.concise2015-04-17 16:01 153KPrediction: coiled-coil, solvent, alignment
[ ]jp_B7WYpqZ.concise.blc2015-04-17 16:01 78KBLC format prediction and alignment data
[ ]jp_B7WYpqZ.concise.fasta2015-04-17 16:01 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_B7WYpqZ.concise.pdf2015-04-17 16:01 520KPDF prediction and alignment data
[ ]jp_B7WYpqZ.concise.ps2015-04-17 16:01 9.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_B7WYpqZ.fasta2015-04-17 15:57 163 Input query sequence in FASTA format
[ ]jp_B7WYpqZ.full_MSA.fasta2015-04-17 16:01 714KFull MSA before JPred filters in FASTA
[TXT]jp_B7WYpqZ.full_MSA.fasta.noGaps.html2015-04-17 16:01 203KFull MSA before JPred filters in FASTA
[TXT]jp_B7WYpqZ.full_MSA.fasta.withGaps.html2015-04-17 16:01 2.2MFull MSA before JPred filters in FASTA
[ ]jp_B7WYpqZ.hmm2015-04-17 16:01 28KHHMer2 profile of the alignment
[TXT]jp_B7WYpqZ.html2015-04-17 16:01 183KHTML prediction and alignment data
[ ]jp_B7WYpqZ.input2015-04-17 15:43 155 Raw input data for analysis
[ ]jp_B7WYpqZ.jalview2015-04-17 16:01 3.9KJalview annotation file for alignment
[ ]jp_B7WYpqZ.jnet2015-04-17 16:01 5.5KJnet secondary structure output
[TXT]jp_B7WYpqZ.profile2015-04-17 15:59 24KPSIBLAST profile from alignment
[ ]jp_B7WYpqZ.pssm2015-04-17 16:01 32KPSIBLAST PSSM for Jnet
[TXT]jp_B7WYpqZ.results.html2016-02-15 12:20 70KJPred results page
[TXT]jp_B7WYpqZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_B7WYpqZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_B7WYpqZ.seq2015-04-17 15:43 163 Sequence data file
[TXT]jp_B7WYpqZ.simple.html2015-04-17 16:01 1.4KBrief HTML: sequence and prediction only
[TXT]jp_B7WYpqZ.svg.html2015-04-17 16:01 61KJalview SVG summary of results
[ ]jp_B7WYpqZ.tar.gz2015-04-17 16:01 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.