A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:01 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2pjua1.name | 2015-04-17 16:57 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_hOWEPgE.align | 2015-04-17 18:00 | 83K | PSIBLAST alignment in FASTA format |
| jp_hOWEPgE.als | 2015-04-17 18:00 | 3.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_hOWEPgE.blast.gz | 2015-04-17 18:00 | 270K | Compressed PSIBLAST output file |
| jp_hOWEPgE.coils.csv | 2015-04-17 18:00 | 1.1K | COILS output in CSV format |
| jp_hOWEPgE.coilseq.lupas_14 | 2015-04-17 18:00 | 7.8K | COILS output, window length 14 |
| jp_hOWEPgE.coilseq.lupas_21 | 2015-04-17 18:00 | 7.8K | COILS output, window length 21 |
| jp_hOWEPgE.coilseq.lupas_28 | 2015-04-17 18:00 | 7.8K | COILS output, window length 28 |
| jp_hOWEPgE.concise | 2015-04-17 18:00 | 168K | Prediction: coiled-coil, solvent, alignment |
| jp_hOWEPgE.concise.blc | 2015-04-17 18:00 | 85K | BLC format prediction and alignment data |
| jp_hOWEPgE.concise.fasta | 2015-04-17 18:00 | 85K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_hOWEPgE.concise.pdf | 2015-04-17 18:00 | 630K | PDF prediction and alignment data |
| jp_hOWEPgE.concise.ps | 2015-04-17 18:00 | 11M | Prediction: coiled-coil, solvent, alignment |
| jp_hOWEPgE.fasta | 2015-04-17 17:55 | 201 | Input query sequence in FASTA format |
| jp_hOWEPgE.full_MSA.fasta | 2015-04-17 18:00 | 311K | Full MSA before JPred filters in FASTA |
| jp_hOWEPgE.full_MSA.fasta.noGaps.html | 2015-04-17 18:00 | 181K | Full MSA before JPred filters in FASTA |
| jp_hOWEPgE.full_MSA.fasta.withGaps.html | 2015-04-17 18:00 | 2.0M | Full MSA before JPred filters in FASTA |
| jp_hOWEPgE.hmm | 2015-04-17 18:00 | 35K | HHMer2 profile of the alignment |
| jp_hOWEPgE.html | 2015-04-17 18:00 | 183K | HTML prediction and alignment data |
| jp_hOWEPgE.input | 2015-04-17 16:57 | 193 | Raw input data for analysis |
| jp_hOWEPgE.jalview | 2015-04-17 18:00 | 4.6K | Jalview annotation file for alignment |
| jp_hOWEPgE.jnet | 2015-04-17 18:00 | 6.8K | Jnet secondary structure output |
| jp_hOWEPgE.profile | 2015-04-17 17:58 | 30K | PSIBLAST profile from alignment |
| jp_hOWEPgE.pssm | 2015-04-17 18:00 | 40K | PSIBLAST PSSM for Jnet |
| jp_hOWEPgE.results.html | 2016-02-15 12:20 | 86K | JPred results page |
| jp_hOWEPgE.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_hOWEPgE.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_hOWEPgE.seq | 2015-04-17 16:57 | 201 | Sequence data file |
| jp_hOWEPgE.simple.html | 2015-04-17 18:00 | 1.6K | Brief HTML: sequence and prediction only |
![[TXT]](jp_hOWEPgE.svg.html) | jp_hOWEPgE.svg.html | 2015-04-17 18:01 | 78K | Jalview SVG summary of results |
| jp_hOWEPgE.tar.gz | 2015-04-17 18:01 | 1.3M | Archive containing complete results |
