JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_0rB7htY.tar.gz2015-04-17 17:33 9.6MArchive containing complete results
[TXT]jp_0rB7htY.svg.html2015-04-17 17:33 133KJalview SVG summary of results
[TXT]jp_0rB7htY.simple.html2015-04-17 17:32 2.2KBrief HTML: sequence and prediction only
[ ]jp_0rB7htY.seq2015-04-17 16:22 342 Sequence data file
[TXT]jp_0rB7htY.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_0rB7htY.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_0rB7htY.results.html2016-02-15 12:20 141KJPred results page
[ ]jp_0rB7htY.pssm2015-04-17 17:32 70KPSIBLAST PSSM for Jnet
[TXT]jp_0rB7htY.profile2015-04-17 17:23 52KPSIBLAST profile from alignment
[ ]jp_0rB7htY.jnet2015-04-17 17:32 12KJnet secondary structure output
[ ]jp_0rB7htY.jalview2015-04-17 17:32 7.4KJalview annotation file for alignment
[ ]jp_0rB7htY.input2015-04-17 16:22 332 Raw input data for analysis
[TXT]jp_0rB7htY.html2015-04-17 17:32 482KHTML prediction and alignment data
[ ]jp_0rB7htY.hmm2015-04-17 17:32 61KHHMer2 profile of the alignment
[TXT]jp_0rB7htY.full_MSA.fasta.withGaps.html2015-04-17 17:33 27MFull MSA before JPred filters in FASTA
[TXT]jp_0rB7htY.full_MSA.fasta.noGaps.html2015-04-17 17:33 1.0MFull MSA before JPred filters in FASTA
[ ]jp_0rB7htY.full_MSA.fasta2015-04-17 17:31 11MFull MSA before JPred filters in FASTA
[ ]jp_0rB7htY.fasta2015-04-17 16:51 342 Input query sequence in FASTA format
[ ]jp_0rB7htY.concise.ps2015-04-17 17:32 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_0rB7htY.concise.pdf2015-04-17 17:33 2.0MPDF prediction and alignment data
[ ]jp_0rB7htY.concise.fasta2015-04-17 17:32 293KPrediction: coiled-coil, solvent, alignment
[ ]jp_0rB7htY.concise.blc2015-04-17 17:32 290KBLC format prediction and alignment data
[ ]jp_0rB7htY.concise2015-04-17 17:32 577KPrediction: coiled-coil, solvent, alignment
[ ]jp_0rB7htY.coilseq.lupas_282015-04-17 17:32 14KCOILS output, window length 28
[ ]jp_0rB7htY.coilseq.lupas_212015-04-17 17:32 14KCOILS output, window length 21
[ ]jp_0rB7htY.coilseq.lupas_142015-04-17 17:32 14KCOILS output, window length 14
[TXT]jp_0rB7htY.coils.csv2015-04-17 17:32 1.9KCOILS output in CSV format
[ ]jp_0rB7htY.blast.gz2015-04-17 17:30 4.8MCompressed PSIBLAST output file
[TXT]jp_0rB7htY.als2015-04-17 17:32 5.2KAlscript command file for PS/PDF output
[ ]jp_0rB7htY.align2015-04-17 17:32 290KPSIBLAST alignment in FASTA format
[TXT]d2ppva_.name2015-04-17 16:22 0 Job name flag file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]LOG2015-04-17 17:33 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.