JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:58 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2qdla_.name2015-04-17 18:10 0 Job name flag file
[ ]jp_T4C9EKI.align2015-04-17 19:57 160KPSIBLAST alignment in FASTA format
[TXT]jp_T4C9EKI.als2015-04-17 19:57 3.2KAlscript command file for PS/PDF output
[ ]jp_T4C9EKI.blast.gz2015-04-17 19:56 5.4MCompressed PSIBLAST output file
[TXT]jp_T4C9EKI.coils.csv2015-04-17 19:57 954 COILS output in CSV format
[ ]jp_T4C9EKI.coilseq.lupas_142015-04-17 19:57 6.5KCOILS output, window length 14
[ ]jp_T4C9EKI.coilseq.lupas_212015-04-17 19:57 6.5KCOILS output, window length 21
[ ]jp_T4C9EKI.coilseq.lupas_282015-04-17 19:57 6.5KCOILS output, window length 28
[ ]jp_T4C9EKI.concise2015-04-17 19:57 313KPrediction: coiled-coil, solvent, alignment
[ ]jp_T4C9EKI.concise.blc2015-04-17 19:57 160KBLC format prediction and alignment data
[ ]jp_T4C9EKI.concise.fasta2015-04-17 19:57 162KPrediction: coiled-coil, solvent, alignment
[ ]jp_T4C9EKI.concise.pdf2015-04-17 19:57 1.1MPDF prediction and alignment data
[ ]jp_T4C9EKI.concise.ps2015-04-17 19:57 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_T4C9EKI.fasta2015-04-17 19:52 169 Input query sequence in FASTA format
[ ]jp_T4C9EKI.full_MSA.fasta2015-04-17 19:57 10MFull MSA before JPred filters in FASTA
[TXT]jp_T4C9EKI.full_MSA.fasta.noGaps.html2015-04-17 19:58 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_T4C9EKI.full_MSA.fasta.withGaps.html2015-04-17 19:58 36MFull MSA before JPred filters in FASTA
[ ]jp_T4C9EKI.hmm2015-04-17 19:57 29KHHMer2 profile of the alignment
[TXT]jp_T4C9EKI.html2015-04-17 19:57 353KHTML prediction and alignment data
[ ]jp_T4C9EKI.input2015-04-17 18:10 161 Raw input data for analysis
[ ]jp_T4C9EKI.jalview2015-04-17 19:57 3.9KJalview annotation file for alignment
[ ]jp_T4C9EKI.jnet2015-04-17 19:57 5.7KJnet secondary structure output
[TXT]jp_T4C9EKI.profile2015-04-17 19:55 25KPSIBLAST profile from alignment
[ ]jp_T4C9EKI.pssm2015-04-17 19:57 33KPSIBLAST PSSM for Jnet
[TXT]jp_T4C9EKI.results.html2016-02-15 12:20 72KJPred results page
[TXT]jp_T4C9EKI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_T4C9EKI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_T4C9EKI.seq2015-04-17 18:10 169 Sequence data file
[TXT]jp_T4C9EKI.simple.html2015-04-17 19:57 1.5KBrief HTML: sequence and prediction only
[TXT]jp_T4C9EKI.svg.html2015-04-17 19:58 64KJalview SVG summary of results
[ ]jp_T4C9EKI.tar.gz2015-04-17 19:58 11MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.