JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:08 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2uv4a_.name2015-04-17 17:35 0 Job name flag file
[ ]jp_3HmzqcP.align2015-04-17 19:07 117KPSIBLAST alignment in FASTA format
[TXT]jp_3HmzqcP.als2015-04-17 19:07 2.9KAlscript command file for PS/PDF output
[ ]jp_3HmzqcP.blast.gz2015-04-17 19:05 12MCompressed PSIBLAST output file
[TXT]jp_3HmzqcP.coils.csv2015-04-17 19:07 888 COILS output in CSV format
[ ]jp_3HmzqcP.coilseq.lupas_142015-04-17 19:07 6.0KCOILS output, window length 14
[ ]jp_3HmzqcP.coilseq.lupas_212015-04-17 19:07 6.0KCOILS output, window length 21
[ ]jp_3HmzqcP.coilseq.lupas_282015-04-17 19:07 6.0KCOILS output, window length 28
[ ]jp_3HmzqcP.concise2015-04-17 19:07 231KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HmzqcP.concise.blc2015-04-17 19:07 118KBLC format prediction and alignment data
[ ]jp_3HmzqcP.concise.fasta2015-04-17 19:07 119KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HmzqcP.concise.pdf2015-04-17 19:07 827KPDF prediction and alignment data
[ ]jp_3HmzqcP.concise.ps2015-04-17 19:07 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_3HmzqcP.fasta2015-04-17 18:52 157 Input query sequence in FASTA format
[ ]jp_3HmzqcP.full_MSA.fasta2015-04-17 19:06 30MFull MSA before JPred filters in FASTA
[TXT]jp_3HmzqcP.full_MSA.fasta.noGaps.html2015-04-17 19:08 3.9MFull MSA before JPred filters in FASTA
[TXT]jp_3HmzqcP.full_MSA.fasta.withGaps.html2015-04-17 19:08 77MFull MSA before JPred filters in FASTA
[ ]jp_3HmzqcP.hmm2015-04-17 19:07 27KHHMer2 profile of the alignment
[TXT]jp_3HmzqcP.html2015-04-17 19:07 271KHTML prediction and alignment data
[ ]jp_3HmzqcP.input2015-04-17 17:35 150 Raw input data for analysis
[ ]jp_3HmzqcP.jalview2015-04-17 19:07 3.7KJalview annotation file for alignment
[ ]jp_3HmzqcP.jnet2015-04-17 19:07 5.3KJnet secondary structure output
[TXT]jp_3HmzqcP.profile2015-04-17 19:03 23KPSIBLAST profile from alignment
[ ]jp_3HmzqcP.pssm2015-04-17 19:07 31KPSIBLAST PSSM for Jnet
[TXT]jp_3HmzqcP.results.html2016-02-15 12:20 67KJPred results page
[TXT]jp_3HmzqcP.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_3HmzqcP.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_3HmzqcP.seq2015-04-17 17:35 157 Sequence data file
[TXT]jp_3HmzqcP.simple.html2015-04-17 19:07 1.4KBrief HTML: sequence and prediction only
[TXT]jp_3HmzqcP.svg.html2015-04-17 19:08 59KJalview SVG summary of results
[ ]jp_3HmzqcP.tar.gz2015-04-17 19:08 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.