JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:04 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2v9la_.name2015-04-17 16:23 0 Job name flag file
[ ]jp_EzdBgou.align2015-04-17 17:02 272KPSIBLAST alignment in FASTA format
[TXT]jp_EzdBgou.als2015-04-17 17:02 3.9KAlscript command file for PS/PDF output
[ ]jp_EzdBgou.blast.gz2015-04-17 17:00 4.2MCompressed PSIBLAST output file
[TXT]jp_EzdBgou.coils.csv2015-04-17 17:02 1.6KCOILS output in CSV format
[ ]jp_EzdBgou.coilseq.lupas_142015-04-17 17:02 11KCOILS output, window length 14
[ ]jp_EzdBgou.coilseq.lupas_212015-04-17 17:02 11KCOILS output, window length 21
[ ]jp_EzdBgou.coilseq.lupas_282015-04-17 17:02 11KCOILS output, window length 28
[ ]jp_EzdBgou.concise2015-04-17 17:02 539KPrediction: coiled-coil, solvent, alignment
[ ]jp_EzdBgou.concise.blc2015-04-17 17:02 272KBLC format prediction and alignment data
[ ]jp_EzdBgou.concise.fasta2015-04-17 17:02 275KPrediction: coiled-coil, solvent, alignment
[ ]jp_EzdBgou.concise.pdf2015-04-17 17:03 1.8MPDF prediction and alignment data
[ ]jp_EzdBgou.concise.ps2015-04-17 17:02 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_EzdBgou.fasta2015-04-17 16:52 289 Input query sequence in FASTA format
[ ]jp_EzdBgou.full_MSA.fasta2015-04-17 17:01 14MFull MSA before JPred filters in FASTA
[TXT]jp_EzdBgou.full_MSA.fasta.noGaps.html2015-04-17 17:03 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_EzdBgou.full_MSA.fasta.withGaps.html2015-04-17 17:03 54MFull MSA before JPred filters in FASTA
[ ]jp_EzdBgou.hmm2015-04-17 17:02 51KHHMer2 profile of the alignment
[TXT]jp_EzdBgou.html2015-04-17 17:02 477KHTML prediction and alignment data
[ ]jp_EzdBgou.input2015-04-17 16:23 280 Raw input data for analysis
[ ]jp_EzdBgou.jalview2015-04-17 17:02 6.3KJalview annotation file for alignment
[ ]jp_EzdBgou.jnet2015-04-17 17:02 10KJnet secondary structure output
[TXT]jp_EzdBgou.profile2015-04-17 16:57 44KPSIBLAST profile from alignment
[ ]jp_EzdBgou.pssm2015-04-17 17:02 59KPSIBLAST PSSM for Jnet
[TXT]jp_EzdBgou.results.html2016-02-15 12:20 118KJPred results page
[TXT]jp_EzdBgou.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_EzdBgou.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_EzdBgou.seq2015-04-17 16:23 289 Sequence data file
[TXT]jp_EzdBgou.simple.html2015-04-17 17:02 1.9KBrief HTML: sequence and prediction only
[TXT]jp_EzdBgou.svg.html2015-04-17 17:04 110KJalview SVG summary of results
[ ]jp_EzdBgou.tar.gz2015-04-17 17:04 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.