JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_6XbQ_Hf.tar.gz2015-04-17 21:07 18MArchive containing complete results
[TXT]jp_6XbQ_Hf.svg.html2015-04-17 21:07 117KJalview SVG summary of results
[TXT]jp_6XbQ_Hf.simple.html2015-04-17 21:04 1.8KBrief HTML: sequence and prediction only
[ ]jp_6XbQ_Hf.seq2015-04-17 18:48 308 Sequence data file
[TXT]jp_6XbQ_Hf.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_6XbQ_Hf.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6XbQ_Hf.results.html2016-02-15 12:20 125KJPred results page
[ ]jp_6XbQ_Hf.pssm2015-04-17 21:04 63KPSIBLAST PSSM for Jnet
[TXT]jp_6XbQ_Hf.profile2015-04-17 20:58 47KPSIBLAST profile from alignment
[ ]jp_6XbQ_Hf.jnet2015-04-17 21:04 11KJnet secondary structure output
[ ]jp_6XbQ_Hf.jalview2015-04-17 21:05 6.7KJalview annotation file for alignment
[ ]jp_6XbQ_Hf.input2015-04-17 18:48 298 Raw input data for analysis
[TXT]jp_6XbQ_Hf.html2015-04-17 21:04 530KHTML prediction and alignment data
[ ]jp_6XbQ_Hf.hmm2015-04-17 21:04 55KHHMer2 profile of the alignment
[TXT]jp_6XbQ_Hf.full_MSA.fasta.withGaps.html2015-04-17 21:06 48MFull MSA before JPred filters in FASTA
[TXT]jp_6XbQ_Hf.full_MSA.fasta.noGaps.html2015-04-17 21:06 1.5MFull MSA before JPred filters in FASTA
[ ]jp_6XbQ_Hf.full_MSA.fasta2015-04-17 21:02 24MFull MSA before JPred filters in FASTA
[ ]jp_6XbQ_Hf.fasta2015-04-17 20:52 308 Input query sequence in FASTA format
[ ]jp_6XbQ_Hf.concise.ps2015-04-17 21:05 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_6XbQ_Hf.concise.pdf2015-04-17 21:05 2.2MPDF prediction and alignment data
[ ]jp_6XbQ_Hf.concise.fasta2015-04-17 21:05 313KPrediction: coiled-coil, solvent, alignment
[ ]jp_6XbQ_Hf.concise.blc2015-04-17 21:05 309KBLC format prediction and alignment data
[ ]jp_6XbQ_Hf.concise2015-04-17 21:04 612KPrediction: coiled-coil, solvent, alignment
[ ]jp_6XbQ_Hf.coilseq.lupas_282015-04-17 21:04 12KCOILS output, window length 28
[ ]jp_6XbQ_Hf.coilseq.lupas_212015-04-17 21:04 12KCOILS output, window length 21
[ ]jp_6XbQ_Hf.coilseq.lupas_142015-04-17 21:04 12KCOILS output, window length 14
[TXT]jp_6XbQ_Hf.coils.csv2015-04-17 21:04 1.7KCOILS output in CSV format
[ ]jp_6XbQ_Hf.blast.gz2015-04-17 21:00 11MCompressed PSIBLAST output file
[TXT]jp_6XbQ_Hf.als2015-04-17 21:05 3.5KAlscript command file for PS/PDF output
[ ]jp_6XbQ_Hf.align2015-04-17 21:04 310KPSIBLAST alignment in FASTA format
[TXT]d2woea_.name2015-04-17 18:48 0 Job name flag file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]LOG2015-04-17 21:07 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.