JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:01 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2wzka_.name2015-04-17 17:36 0 Job name flag file
[ ]jp_fEWbZWK.align2015-04-17 19:00 398KPSIBLAST alignment in FASTA format
[TXT]jp_fEWbZWK.als2015-04-17 19:00 3.8KAlscript command file for PS/PDF output
[ ]jp_fEWbZWK.blast.gz2015-04-17 18:58 4.0MCompressed PSIBLAST output file
[TXT]jp_fEWbZWK.coils.csv2015-04-17 19:00 2.2KCOILS output in CSV format
[ ]jp_fEWbZWK.coilseq.lupas_142015-04-17 19:00 15KCOILS output, window length 14
[ ]jp_fEWbZWK.coilseq.lupas_212015-04-17 19:00 15KCOILS output, window length 21
[ ]jp_fEWbZWK.coilseq.lupas_282015-04-17 19:00 15KCOILS output, window length 28
[ ]jp_fEWbZWK.concise2015-04-17 19:00 791KPrediction: coiled-coil, solvent, alignment
[ ]jp_fEWbZWK.concise.blc2015-04-17 19:00 398KBLC format prediction and alignment data
[ ]jp_fEWbZWK.concise.fasta2015-04-17 19:00 402KPrediction: coiled-coil, solvent, alignment
[ ]jp_fEWbZWK.concise.pdf2015-04-17 19:01 2.8MPDF prediction and alignment data
[ ]jp_fEWbZWK.concise.ps2015-04-17 19:00 51MPrediction: coiled-coil, solvent, alignment
[ ]jp_fEWbZWK.fasta2015-04-17 18:54 387 Input query sequence in FASTA format
[ ]jp_fEWbZWK.full_MSA.fasta2015-04-17 18:59 7.9MFull MSA before JPred filters in FASTA
[TXT]jp_fEWbZWK.full_MSA.fasta.noGaps.html2015-04-17 19:01 860KFull MSA before JPred filters in FASTA
[TXT]jp_fEWbZWK.full_MSA.fasta.withGaps.html2015-04-17 19:01 21MFull MSA before JPred filters in FASTA
[ ]jp_fEWbZWK.hmm2015-04-17 19:00 69KHHMer2 profile of the alignment
[TXT]jp_fEWbZWK.html2015-04-17 19:00 634KHTML prediction and alignment data
[ ]jp_fEWbZWK.input2015-04-17 17:36 376 Raw input data for analysis
[ ]jp_fEWbZWK.jalview2015-04-17 19:00 8.5KJalview annotation file for alignment
[ ]jp_fEWbZWK.jnet2015-04-17 19:00 13KJnet secondary structure output
[TXT]jp_fEWbZWK.profile2015-04-17 18:57 59KPSIBLAST profile from alignment
[ ]jp_fEWbZWK.pssm2015-04-17 19:00 79KPSIBLAST PSSM for Jnet
[TXT]jp_fEWbZWK.results.html2016-02-15 12:20 153KJPred results page
[TXT]jp_fEWbZWK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_fEWbZWK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_fEWbZWK.seq2015-04-17 17:36 387 Sequence data file
[TXT]jp_fEWbZWK.simple.html2015-04-17 19:00 2.0KBrief HTML: sequence and prediction only
[TXT]jp_fEWbZWK.svg.html2015-04-17 19:01 145KJalview SVG summary of results
[ ]jp_fEWbZWK.tar.gz2015-04-17 19:01 9.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.