JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:36 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2xdwa1.name2015-04-17 18:32 0 Job name flag file
[ ]jp_R0IFbPY.align2015-04-17 20:35 493KPSIBLAST alignment in FASTA format
[TXT]jp_R0IFbPY.als2015-04-17 20:35 6.6KAlscript command file for PS/PDF output
[ ]jp_R0IFbPY.blast.gz2015-04-17 20:32 9.7MCompressed PSIBLAST output file
[TXT]jp_R0IFbPY.coils.csv2015-04-17 20:35 2.5KCOILS output in CSV format
[ ]jp_R0IFbPY.coilseq.lupas_142015-04-17 20:35 18KCOILS output, window length 14
[ ]jp_R0IFbPY.coilseq.lupas_212015-04-17 20:35 18KCOILS output, window length 21
[ ]jp_R0IFbPY.coilseq.lupas_282015-04-17 20:35 18KCOILS output, window length 28
[ ]jp_R0IFbPY.concise2015-04-17 20:35 1.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_R0IFbPY.concise.blc2015-04-17 20:35 493KBLC format prediction and alignment data
[ ]jp_R0IFbPY.concise.fasta2015-04-17 20:35 498KPrediction: coiled-coil, solvent, alignment
[ ]jp_R0IFbPY.concise.pdf2015-04-17 20:36 3.3MPDF prediction and alignment data
[ ]jp_R0IFbPY.concise.ps2015-04-17 20:35 61MPrediction: coiled-coil, solvent, alignment
[ ]jp_R0IFbPY.fasta2015-04-17 20:28 448 Input query sequence in FASTA format
[ ]jp_R0IFbPY.full_MSA.fasta2015-04-17 20:33 21MFull MSA before JPred filters in FASTA
[TXT]jp_R0IFbPY.full_MSA.fasta.noGaps.html2015-04-17 20:36 2.1MFull MSA before JPred filters in FASTA
[TXT]jp_R0IFbPY.full_MSA.fasta.withGaps.html2015-04-17 20:36 60MFull MSA before JPred filters in FASTA
[ ]jp_R0IFbPY.hmm2015-04-17 20:35 81KHHMer2 profile of the alignment
[TXT]jp_R0IFbPY.html2015-04-17 20:35 738KHTML prediction and alignment data
[ ]jp_R0IFbPY.input2015-04-17 18:32 437 Raw input data for analysis
[ ]jp_R0IFbPY.jalview2015-04-17 20:35 9.4KJalview annotation file for alignment
[ ]jp_R0IFbPY.jnet2015-04-17 20:35 16KJnet secondary structure output
[TXT]jp_R0IFbPY.profile2015-04-17 20:31 69KPSIBLAST profile from alignment
[ ]jp_R0IFbPY.pssm2015-04-17 20:35 92KPSIBLAST PSSM for Jnet
[TXT]jp_R0IFbPY.results.html2016-02-15 12:20 177KJPred results page
[TXT]jp_R0IFbPY.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_R0IFbPY.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_R0IFbPY.seq2015-04-17 18:32 448 Sequence data file
[TXT]jp_R0IFbPY.simple.html2015-04-17 20:35 2.5KBrief HTML: sequence and prediction only
[TXT]jp_R0IFbPY.svg.html2015-04-17 20:36 169KJalview SVG summary of results
[ ]jp_R0IFbPY.tar.gz2015-04-17 20:36 20MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.