JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:26 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2xzga1.name2015-04-17 17:36 0 Job name flag file
[ ]jp_69xYHxb.align2015-04-17 19:26 69KPSIBLAST alignment in FASTA format
[TXT]jp_69xYHxb.als2015-04-17 19:26 6.2KAlscript command file for PS/PDF output
[ ]jp_69xYHxb.blast.gz2015-04-17 19:25 422KCompressed PSIBLAST output file
[TXT]jp_69xYHxb.coils.csv2015-04-17 19:26 2.1KCOILS output in CSV format
[ ]jp_69xYHxb.coilseq.lupas_142015-04-17 19:26 15KCOILS output, window length 14
[ ]jp_69xYHxb.coilseq.lupas_212015-04-17 19:26 15KCOILS output, window length 21
[ ]jp_69xYHxb.coilseq.lupas_282015-04-17 19:26 15KCOILS output, window length 28
[ ]jp_69xYHxb.concise2015-04-17 19:26 149KPrediction: coiled-coil, solvent, alignment
[ ]jp_69xYHxb.concise.blc2015-04-17 19:26 73KBLC format prediction and alignment data
[ ]jp_69xYHxb.concise.fasta2015-04-17 19:26 72KPrediction: coiled-coil, solvent, alignment
[ ]jp_69xYHxb.concise.pdf2015-04-17 19:26 510KPDF prediction and alignment data
[ ]jp_69xYHxb.concise.ps2015-04-17 19:26 9.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_69xYHxb.fasta2015-04-17 18:55 375 Input query sequence in FASTA format
[ ]jp_69xYHxb.full_MSA.fasta2015-04-17 19:26 617KFull MSA before JPred filters in FASTA
[TXT]jp_69xYHxb.full_MSA.fasta.noGaps.html2015-04-17 19:26 208KFull MSA before JPred filters in FASTA
[TXT]jp_69xYHxb.full_MSA.fasta.withGaps.html2015-04-17 19:26 2.3MFull MSA before JPred filters in FASTA
[ ]jp_69xYHxb.hmm2015-04-17 19:26 67KHHMer2 profile of the alignment
[TXT]jp_69xYHxb.html2015-04-17 19:26 138KHTML prediction and alignment data
[ ]jp_69xYHxb.input2015-04-17 17:36 365 Raw input data for analysis
[ ]jp_69xYHxb.jalview2015-04-17 19:26 8.0KJalview annotation file for alignment
[ ]jp_69xYHxb.jnet2015-04-17 19:26 13KJnet secondary structure output
[TXT]jp_69xYHxb.profile2015-04-17 19:17 57KPSIBLAST profile from alignment
[ ]jp_69xYHxb.pssm2015-04-17 19:26 77KPSIBLAST PSSM for Jnet
[TXT]jp_69xYHxb.results.html2016-02-15 12:20 152KJPred results page
[TXT]jp_69xYHxb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_69xYHxb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_69xYHxb.seq2015-04-17 17:36 375 Sequence data file
[TXT]jp_69xYHxb.simple.html2015-04-17 19:26 2.4KBrief HTML: sequence and prediction only
[TXT]jp_69xYHxb.svg.html2015-04-17 19:26 144KJalview SVG summary of results
[ ]jp_69xYHxb.tar.gz2015-04-17 19:26 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.