JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:39 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2y0ta_.name2015-04-17 18:34 0 Job name flag file
[ ]jp_g8Bxpny.align2015-04-17 20:39 66KPSIBLAST alignment in FASTA format
[TXT]jp_g8Bxpny.als2015-04-17 20:39 1.6KAlscript command file for PS/PDF output
[ ]jp_g8Bxpny.blast.gz2015-04-17 20:38 1.4MCompressed PSIBLAST output file
[TXT]jp_g8Bxpny.coils.csv2015-04-17 20:39 342 COILS output in CSV format
[ ]jp_g8Bxpny.coilseq.lupas_142015-04-17 20:39 2.2KCOILS output, window length 14
[ ]jp_g8Bxpny.coilseq.lupas_212015-04-17 20:39 2.2KCOILS output, window length 21
[ ]jp_g8Bxpny.coilseq.lupas_282015-04-17 20:39 2.2KCOILS output, window length 28
[ ]jp_g8Bxpny.concise2015-04-17 20:39 124KPrediction: coiled-coil, solvent, alignment
[ ]jp_g8Bxpny.concise.blc2015-04-17 20:39 66KBLC format prediction and alignment data
[ ]jp_g8Bxpny.concise.fasta2015-04-17 20:39 67KPrediction: coiled-coil, solvent, alignment
[ ]jp_g8Bxpny.concise.pdf2015-04-17 20:39 384KPDF prediction and alignment data
[ ]jp_g8Bxpny.concise.ps2015-04-17 20:39 6.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_g8Bxpny.fasta2015-04-17 20:31 65 Input query sequence in FASTA format
[ ]jp_g8Bxpny.full_MSA.fasta2015-04-17 20:38 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_g8Bxpny.full_MSA.fasta.noGaps.html2015-04-17 20:39 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_g8Bxpny.full_MSA.fasta.withGaps.html2015-04-17 20:39 12MFull MSA before JPred filters in FASTA
[ ]jp_g8Bxpny.hmm2015-04-17 20:39 9.8KHHMer2 profile of the alignment
[TXT]jp_g8Bxpny.html2015-04-17 20:39 256KHTML prediction and alignment data
[ ]jp_g8Bxpny.input2015-04-17 18:34 59 Raw input data for analysis
[ ]jp_g8Bxpny.jalview2015-04-17 20:39 1.9KJalview annotation file for alignment
[ ]jp_g8Bxpny.jnet2015-04-17 20:39 2.0KJnet secondary structure output
[TXT]jp_g8Bxpny.profile2015-04-17 20:36 8.7KPSIBLAST profile from alignment
[ ]jp_g8Bxpny.pssm2015-04-17 20:39 11KPSIBLAST PSSM for Jnet
[TXT]jp_g8Bxpny.results.html2016-02-15 12:20 31KJPred results page
[TXT]jp_g8Bxpny.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_g8Bxpny.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_g8Bxpny.seq2015-04-17 18:34 65 Sequence data file
[TXT]jp_g8Bxpny.simple.html2015-04-17 20:39 1.0KBrief HTML: sequence and prediction only
[TXT]jp_g8Bxpny.svg.html2015-04-17 20:39 23KJalview SVG summary of results
[ ]jp_g8Bxpny.tar.gz2015-04-17 20:39 3.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.