JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:33 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3c8wa1.name2015-04-17 15:47 0 Job name flag file
[ ]jp_Aet8nZl.align2015-04-17 16:33 184KPSIBLAST alignment in FASTA format
[TXT]jp_Aet8nZl.als2015-04-17 16:33 4.1KAlscript command file for PS/PDF output
[ ]jp_Aet8nZl.blast.gz2015-04-17 16:32 791KCompressed PSIBLAST output file
[TXT]jp_Aet8nZl.coils.csv2015-04-17 16:33 1.5KCOILS output in CSV format
[ ]jp_Aet8nZl.coilseq.lupas_142015-04-17 16:33 10KCOILS output, window length 14
[ ]jp_Aet8nZl.coilseq.lupas_212015-04-17 16:33 10KCOILS output, window length 21
[ ]jp_Aet8nZl.coilseq.lupas_282015-04-17 16:33 10KCOILS output, window length 28
[ ]jp_Aet8nZl.concise2015-04-17 16:33 367KPrediction: coiled-coil, solvent, alignment
[ ]jp_Aet8nZl.concise.blc2015-04-17 16:33 185KBLC format prediction and alignment data
[ ]jp_Aet8nZl.concise.fasta2015-04-17 16:33 187KPrediction: coiled-coil, solvent, alignment
[ ]jp_Aet8nZl.concise.pdf2015-04-17 16:33 1.2MPDF prediction and alignment data
[ ]jp_Aet8nZl.concise.ps2015-04-17 16:33 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_Aet8nZl.fasta2015-04-17 16:00 266 Input query sequence in FASTA format
[ ]jp_Aet8nZl.full_MSA.fasta2015-04-17 16:32 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_Aet8nZl.full_MSA.fasta.noGaps.html2015-04-17 16:33 371KFull MSA before JPred filters in FASTA
[TXT]jp_Aet8nZl.full_MSA.fasta.withGaps.html2015-04-17 16:33 7.1MFull MSA before JPred filters in FASTA
[ ]jp_Aet8nZl.hmm2015-04-17 16:33 47KHHMer2 profile of the alignment
[TXT]jp_Aet8nZl.html2015-04-17 16:33 340KHTML prediction and alignment data
[ ]jp_Aet8nZl.input2015-04-17 15:47 257 Raw input data for analysis
[ ]jp_Aet8nZl.jalview2015-04-17 16:33 5.8KJalview annotation file for alignment
[ ]jp_Aet8nZl.jnet2015-04-17 16:33 9.1KJnet secondary structure output
[TXT]jp_Aet8nZl.profile2015-04-17 16:23 40KPSIBLAST profile from alignment
[ ]jp_Aet8nZl.pssm2015-04-17 16:33 54KPSIBLAST PSSM for Jnet
[TXT]jp_Aet8nZl.results.html2016-02-15 12:20 108KJPred results page
[TXT]jp_Aet8nZl.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Aet8nZl.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Aet8nZl.seq2015-04-17 15:47 266 Sequence data file
[TXT]jp_Aet8nZl.simple.html2015-04-17 16:33 1.9KBrief HTML: sequence and prediction only
[TXT]jp_Aet8nZl.svg.html2015-04-17 16:33 100KJalview SVG summary of results
[ ]jp_Aet8nZl.tar.gz2015-04-17 16:33 2.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.