JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:36 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3c8ya1.name2015-04-17 18:50 0 Job name flag file
[ ]jp_zWFyE_L.align2015-04-17 21:34 294KPSIBLAST alignment in FASTA format
[TXT]jp_zWFyE_L.als2015-04-17 21:34 4.7KAlscript command file for PS/PDF output
[ ]jp_zWFyE_L.blast.gz2015-04-17 21:32 7.5MCompressed PSIBLAST output file
[TXT]jp_zWFyE_L.coils.csv2015-04-17 21:34 2.2KCOILS output in CSV format
[ ]jp_zWFyE_L.coilseq.lupas_142015-04-17 21:34 15KCOILS output, window length 14
[ ]jp_zWFyE_L.coilseq.lupas_212015-04-17 21:34 15KCOILS output, window length 21
[ ]jp_zWFyE_L.coilseq.lupas_282015-04-17 21:34 15KCOILS output, window length 28
[ ]jp_zWFyE_L.concise2015-04-17 21:34 588KPrediction: coiled-coil, solvent, alignment
[ ]jp_zWFyE_L.concise.blc2015-04-17 21:34 295KBLC format prediction and alignment data
[ ]jp_zWFyE_L.concise.fasta2015-04-17 21:34 298KPrediction: coiled-coil, solvent, alignment
[ ]jp_zWFyE_L.concise.pdf2015-04-17 21:35 2.0MPDF prediction and alignment data
[ ]jp_zWFyE_L.concise.ps2015-04-17 21:34 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_zWFyE_L.fasta2015-04-17 20:56 383 Input query sequence in FASTA format
[ ]jp_zWFyE_L.full_MSA.fasta2015-04-17 21:33 15MFull MSA before JPred filters in FASTA
[TXT]jp_zWFyE_L.full_MSA.fasta.noGaps.html2015-04-17 21:35 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_zWFyE_L.full_MSA.fasta.withGaps.html2015-04-17 21:35 39MFull MSA before JPred filters in FASTA
[ ]jp_zWFyE_L.hmm2015-04-17 21:34 68KHHMer2 profile of the alignment
[TXT]jp_zWFyE_L.html2015-04-17 21:34 476KHTML prediction and alignment data
[ ]jp_zWFyE_L.input2015-04-17 18:50 372 Raw input data for analysis
[ ]jp_zWFyE_L.jalview2015-04-17 21:34 8.1KJalview annotation file for alignment
[ ]jp_zWFyE_L.jnet2015-04-17 21:34 13KJnet secondary structure output
[TXT]jp_zWFyE_L.profile2015-04-17 21:22 58KPSIBLAST profile from alignment
[ ]jp_zWFyE_L.pssm2015-04-17 21:34 78KPSIBLAST PSSM for Jnet
[TXT]jp_zWFyE_L.results.html2016-02-15 12:20 154KJPred results page
[TXT]jp_zWFyE_L.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_zWFyE_L.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_zWFyE_L.seq2015-04-17 18:50 383 Sequence data file
[TXT]jp_zWFyE_L.simple.html2015-04-17 21:34 2.2KBrief HTML: sequence and prediction only
[TXT]jp_zWFyE_L.svg.html2015-04-17 21:36 146KJalview SVG summary of results
[ ]jp_zWFyE_L.tar.gz2015-04-17 21:36 13MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.