JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:23 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3c9ua1.name2015-04-17 18:56 0 Job name flag file
[ ]jp_eDJ4aK6.align2015-04-17 21:21 288KPSIBLAST alignment in FASTA format
[TXT]jp_eDJ4aK6.als2015-04-17 21:21 4.4KAlscript command file for PS/PDF output
[ ]jp_eDJ4aK6.blast.gz2015-04-17 21:16 19MCompressed PSIBLAST output file
[TXT]jp_eDJ4aK6.coils.csv2015-04-17 21:21 1.8KCOILS output in CSV format
[ ]jp_eDJ4aK6.coilseq.lupas_142015-04-17 21:21 13KCOILS output, window length 14
[ ]jp_eDJ4aK6.coilseq.lupas_212015-04-17 21:21 13KCOILS output, window length 21
[ ]jp_eDJ4aK6.coilseq.lupas_282015-04-17 21:21 13KCOILS output, window length 28
[ ]jp_eDJ4aK6.concise2015-04-17 21:21 571KPrediction: coiled-coil, solvent, alignment
[ ]jp_eDJ4aK6.concise.blc2015-04-17 21:21 288KBLC format prediction and alignment data
[ ]jp_eDJ4aK6.concise.fasta2015-04-17 21:21 291KPrediction: coiled-coil, solvent, alignment
[ ]jp_eDJ4aK6.concise.pdf2015-04-17 21:22 2.0MPDF prediction and alignment data
[ ]jp_eDJ4aK6.concise.ps2015-04-17 21:22 36MPrediction: coiled-coil, solvent, alignment
[ ]jp_eDJ4aK6.fasta2015-04-17 21:04 325 Input query sequence in FASTA format
[ ]jp_eDJ4aK6.full_MSA.fasta2015-04-17 21:20 50MFull MSA before JPred filters in FASTA
[TXT]jp_eDJ4aK6.full_MSA.fasta.noGaps.html2015-04-17 21:23 4.3MFull MSA before JPred filters in FASTA
[TXT]jp_eDJ4aK6.full_MSA.fasta.withGaps.html2015-04-17 21:23 121MFull MSA before JPred filters in FASTA
[ ]jp_eDJ4aK6.hmm2015-04-17 21:21 58KHHMer2 profile of the alignment
[TXT]jp_eDJ4aK6.html2015-04-17 21:21 486KHTML prediction and alignment data
[ ]jp_eDJ4aK6.input2015-04-17 18:56 315 Raw input data for analysis
[ ]jp_eDJ4aK6.jalview2015-04-17 21:21 7.0KJalview annotation file for alignment
[ ]jp_eDJ4aK6.jnet2015-04-17 21:21 11KJnet secondary structure output
[TXT]jp_eDJ4aK6.profile2015-04-17 21:13 49KPSIBLAST profile from alignment
[ ]jp_eDJ4aK6.pssm2015-04-17 21:21 66KPSIBLAST PSSM for Jnet
[TXT]jp_eDJ4aK6.results.html2016-02-15 12:21 132KJPred results page
[TXT]jp_eDJ4aK6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eDJ4aK6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eDJ4aK6.seq2015-04-17 18:56 325 Sequence data file
[TXT]jp_eDJ4aK6.simple.html2015-04-17 21:21 2.0KBrief HTML: sequence and prediction only
[TXT]jp_eDJ4aK6.svg.html2015-04-17 21:23 124KJalview SVG summary of results
[ ]jp_eDJ4aK6.tar.gz2015-04-17 21:24 34MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.